Cluster: HRGMv2_1752_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1752
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1752_7 | HRGMv2_1752_7_108 | 121449 | 122459 | + | GH177 |
| TC | HRGMv2_1752_7 | HRGMv2_1752_7_109 | 122753 | 123706 | - | 3.A.1.2.15 |
| TC | HRGMv2_1752_7 | HRGMv2_1752_7_110 | 123762 | 125273 | - | 3.A.1.2.20 |
| TC | HRGMv2_1752_7 | HRGMv2_1752_7_111 | 125334 | 126266 | - | 3.A.1.2.1 |
| TC | HRGMv2_1752_7 | HRGMv2_1752_7_112 | 126345 | 127283 | - | 3.A.1.2.14 |
| CAZyme | HRGMv2_1752_7 | HRGMv2_1752_7_113 | 127553 | 128692 | - | GH179 |
Gene ID: HRGMv2_1752_7_108
Type: CAZyme
Location: 121449 - 122459 (+)
Type: CAZyme
Location: 121449 - 122459 (+)
Gene ID: HRGMv2_1752_7_109
Type: TC
Location: 122753 - 123706 (-)
Type: TC
Location: 122753 - 123706 (-)
Gene ID: HRGMv2_1752_7_110
Type: TC
Location: 123762 - 125273 (-)
Type: TC
Location: 123762 - 125273 (-)
Gene ID: HRGMv2_1752_7_111
Type: TC
Location: 125334 - 126266 (-)
Type: TC
Location: 125334 - 126266 (-)
Gene ID: HRGMv2_1752_7_112
Type: TC
Location: 126345 - 127283 (-)
Type: TC
Location: 126345 - 127283 (-)
Gene ID: HRGMv2_1752_7_113
Type: CAZyme
Location: 127553 - 128692 (-)
Type: CAZyme
Location: 127553 - 128692 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.