Cluster: HRGMv2_1750_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1750
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1750_3 | HRGMv2_1750_3_106 | 114986 | 116038 | - | GT28 |
| TC | HRGMv2_1750_3 | HRGMv2_1750_3_107 | 116047 | 117231 | - | 2.A.103.1.1 |
| pfam | HRGMv2_1750_3 | HRGMv2_1750_3_108 | 117246 | 118559 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_1750_3 | HRGMv2_1750_3_109 | 118622 | 119704 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_1750_3_106
Type: CAZyme
Location: 114986 - 116038 (-)
Type: CAZyme
Location: 114986 - 116038 (-)
Gene ID: HRGMv2_1750_3_107
Type: TC
Location: 116047 - 117231 (-)
Type: TC
Location: 116047 - 117231 (-)
Gene ID: HRGMv2_1750_3_108
Type: pfam
Location: 117246 - 118559 (-)
Type: pfam
Location: 117246 - 118559 (-)
Gene ID: HRGMv2_1750_3_109
Type: TC
Location: 118622 - 119704 (-)
Type: TC
Location: 118622 - 119704 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp900756875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.