Cluster: HRGMv2_1750_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_1750
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1750_2 | HRGMv2_1750_2_286 | 291529 | 292974 | - | 2.A.66.2.16 |
| NULL(UNKNOWN) | HRGMv2_1750_2 | HRGMv2_1750_2_287 | 292971 | 294146 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1750_2 | HRGMv2_1750_2_288 | 294155 | 295153 | - | GT2 |
| CAZyme | HRGMv2_1750_2 | HRGMv2_1750_2_289 | 295169 | 296224 | - | GT2 |
| pfam | HRGMv2_1750_2 | HRGMv2_1750_2_290 | 296217 | 297029 | - | LicD |
| CAZyme | HRGMv2_1750_2 | HRGMv2_1750_2_291 | 297033 | 297833 | - | GT111 |
Gene ID: HRGMv2_1750_2_286
Type: TC
Location: 291529 - 292974 (-)
Type: TC
Location: 291529 - 292974 (-)
Gene ID: HRGMv2_1750_2_287
Type:
Location: 292971 - 294146 (-)
Type:
Location: 292971 - 294146 (-)
Gene ID: HRGMv2_1750_2_288
Type: CAZyme
Location: 294155 - 295153 (-)
Type: CAZyme
Location: 294155 - 295153 (-)
Gene ID: HRGMv2_1750_2_289
Type: CAZyme
Location: 295169 - 296224 (-)
Type: CAZyme
Location: 295169 - 296224 (-)
Gene ID: HRGMv2_1750_2_290
Type: pfam
Location: 296217 - 297029 (-)
Type: pfam
Location: 296217 - 297029 (-)
Gene ID: HRGMv2_1750_2_291
Type: CAZyme
Location: 297033 - 297833 (-)
Type: CAZyme
Location: 297033 - 297833 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp900756875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.