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Cluster: HRGMv2_1750_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1750_6 HRGMv2_1750_6_98 78467 79708 - GT2
CAZyme HRGMv2_1750_6 HRGMv2_1750_6_99 79718 81634 - CE4 | GH153
TC HRGMv2_1750_6 HRGMv2_1750_6_100 81656 84073 - 1.B.55.1.3
TC HRGMv2_1750_6 HRGMv2_1750_6_101 84283 85050 - 3.A.1.14.8
TC HRGMv2_1750_6 HRGMv2_1750_6_102 85050 86033 - 3.A.1.14.1
TC HRGMv2_1750_6 HRGMv2_1750_6_103 86033 87022 - 3.A.1.14.1
TC HRGMv2_1750_6 HRGMv2_1750_6_104 87022 87912 - 3.A.1.14.1
Gene ID: HRGMv2_1750_6_98
Type: CAZyme
Location: 78467 - 79708 (-)
Gene ID: HRGMv2_1750_6_99
Type: CAZyme
Location: 79718 - 81634 (-)
Gene ID: HRGMv2_1750_6_100
Type: TC
Location: 81656 - 84073 (-)
Gene ID: HRGMv2_1750_6_101
Type: TC
Location: 84283 - 85050 (-)
Gene ID: HRGMv2_1750_6_102
Type: TC
Location: 85050 - 86033 (-)
Gene ID: HRGMv2_1750_6_103
Type: TC
Location: 86033 - 87022 (-)
Gene ID: HRGMv2_1750_6_104
Type: TC
Location: 87022 - 87912 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1750_6_103 vegetarian > omnivore 1.38647 0.01189
HRGMv2_1750_6_104 vegetarian > omnivore 1.41919 0.01189

🧭 Explore Read Mapping of CGC

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