dbCAN Logo

Cluster: HRGMv2_1736_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1736_3 HRGMv2_1736_3_57 62520 63779 - GT4
CAZyme HRGMv2_1736_3 HRGMv2_1736_3_58 63779 64705 - CE4
NULL(UNKNOWN) HRGMv2_1736_3 HRGMv2_1736_3_59 64708 65652 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1736_3 HRGMv2_1736_3_60 65862 67088 - GT4
pfam HRGMv2_1736_3 HRGMv2_1736_3_61 67090 68232 - Epimerase_2
CAZyme HRGMv2_1736_3 HRGMv2_1736_3_62 68222 69307 - GT17
CAZyme HRGMv2_1736_3 HRGMv2_1736_3_63 69333 70229 - GT11
pfam HRGMv2_1736_3 HRGMv2_1736_3_64 70533 72299 - Glycos_transf_2 | Glycos_transf_2
NULL(UNKNOWN) HRGMv2_1736_3 HRGMv2_1736_3_65 73594 73746 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1736_3 HRGMv2_1736_3_66 74508 75752 + 3.A.1.103.5
Gene ID: HRGMv2_1736_3_57
Type: CAZyme
Location: 62520 - 63779 (-)
Gene ID: HRGMv2_1736_3_58
Type: CAZyme
Location: 63779 - 64705 (-)
Gene ID: HRGMv2_1736_3_59
Type:
Location: 64708 - 65652 (-)
Gene ID: HRGMv2_1736_3_60
Type: CAZyme
Location: 65862 - 67088 (-)
Gene ID: HRGMv2_1736_3_61
Type: pfam
Location: 67090 - 68232 (-)
Gene ID: HRGMv2_1736_3_62
Type: CAZyme
Location: 68222 - 69307 (-)
Gene ID: HRGMv2_1736_3_63
Type: CAZyme
Location: 69333 - 70229 (-)
Gene ID: HRGMv2_1736_3_64
Type: pfam
Location: 70533 - 72299 (-)
Gene ID: HRGMv2_1736_3_65
Type:
Location: 73594 - 73746 (-)
Gene ID: HRGMv2_1736_3_66
Type: TC
Location: 74508 - 75752 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List