PROTEIN: HRGMv2_1736_3_59
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Protein File & Metadata
Source:
HRGMv2_1736_3_59.pdb
Genome ID:
Protein ID:
HRGMv2_1736_3_59
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Protein Sequence
MIAPIIIFAF NRPHHLKNTL EALQRNSLAA QSDLFIYCDG ARSNAEKKLT EETRGVARNA 60 LGFRSVTVAA SEVNQGLGES IIRGVTEIIA KHERVIVLED DLLTAPFFLE YMNAGLDIYA 120 DNPRVASVHG YLYPHTVSCP PETFFLKGTD CLGWGTWKRA WDIFDPDAAR LLQRIRDAAC 180 VHDFNAQGCY NFTGLLADVA EKRNSSWAVR WHAAAYLQDM YTLYPGRSLI FHAGSDGSGT 240 NCGVDTLFDV PLSTSPIEVT PIEVRPDPTM VEARLSILLK ESGGRFGIFK TRIRQCFPFL 300 GKVWDALRGK KIRR 314
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q4DMC0-F1-model_v4 | 1 | 276 | 66 | 367 | 0.6634 |
0.8342 |
| AF-Q4D3G6-F1-model_v4 | 1 | 276 | 66 | 367 | 0.6628 |
0.8333 |
| AF-A0A3P7DV18-F1-model_v4 | 1 | 271 | 44 | 304 | 0.6452 |
0.7735 |
| AF-A0A044SGH9-F1-model_v4 | 1 | 314 | 14 | 417 | 0.6255 |
0.7298 |
| AF-A0A3P7Q5X9-F1-model_v4 | 1 | 282 | 36 | 345 | 0.625 |
0.7426 |
| AF-A0A044SYE9-F1-model_v4 | 1 | 313 | 48 | 397 | 0.6016 |
0.6845 |
| AF-A0A0K0ETJ8-F1-model_v4 | 1 | 312 | 37 | 437 | 0.5955 |
0.7112 |
| AF-G5EBG7-F1-model_v4 | 1 | 313 | 70 | 461 | 0.5944 |
0.7222 |
| AF-A0A0R0E9B2-F1-model_v4 | 1 | 295 | 8 | 314 | 0.5854 |
0.6816 |
| AF-A0A0K0JHB5-F1-model_v4 | 1 | 282 | 75 | 383 | 0.5788 |
0.7376 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-B5EGU2-F1-model_v4 | GT0 | 1 | 307 | 1 | 297 | 0.9301 |
0.9676 |
| AF-A0A2K8MS30-F1-model_v4 | GT0 | 1 | 304 | 4 | 298 | 0.9297 |
0.9716 |
| AF-F0R6L0-F1-model_v4 | GT0 | 1 | 312 | 1 | 302 | 0.9114 |
0.9375 |
| AF-G0GAY3-F1-model_v4 | GT0 | 1 | 307 | 3 | 304 | 0.9047 |
0.9382 |
| UPQ39336.1 | GT0 | 1 | 307 | 4 | 303 | 0.9041 |
0.9416 |
| AF-C6W5Q2-F1-model_v4 | GT0 | 1 | 297 | 3 | 297 | 0.901 |
0.9436 |
| AF-F0SBB0-F1-model_v4 | GT0 | 1 | 303 | 3 | 299 | 0.8971 |
0.9375 |
| WFB91434.1 | GT0 | 1 | 302 | 1 | 302 | 0.8965 |
0.9282 |
| AF-E3H7A4-F1-model_v4 | GT0 | 1 | 311 | 3 | 308 | 0.8953 |
0.9275 |
| A0A9X1PGV1 | GT0 | 1 | 297 | 6 | 300 | 0.8951 |
0.9424 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1B1U5H3 | GT13 | 1 | 314 | 5 | 302 | 0.8878 |
0.934 |
| WBV42548.1 | GT13 | 1 | 297 | 11 | 310 | 0.7004 |
0.7507 |
| R5FYV9 | GT2 | 1 | 311 | 292 | 585 | 0.6675 |
0.9345 |
| A0A9C7F9S2 | GT4 | 1 | 307 | 4 | 529 | 0.6358 |
0.9178 |
| A0A0U2U6P0 | GT2 | 1 | 314 | 8 | 239 | 0.6226 |
0.7431 |
| A0A1H0ZRL5 | GT2 | 1 | 309 | 2 | 264 | 0.6214 |
0.6957 |
| A0A6M3KPW1 | GT2 | 1 | 295 | 1 | 213 | 0.6201 |
0.7789 |
| A0A6C0FS56 | GT2 | 1 | 312 | 1 | 267 | 0.6146 |
0.6833 |
| QVL36820.1 | GT2 | 1 | 308 | 3 | 269 | 0.612 |
0.6833 |
| A0A1D9P448 | GT2 | 2 | 307 | 1 | 260 | 0.6117 |
0.7101 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2apc-assembly1.cif.gz_A | 1 | 282 | 1 | 305 | 0.6239 |
0.734 |
| 1fo8-assembly1.cif.gz_A | 1 | 282 | 2 | 293 | 0.6049 |
0.7003 |
| 5ggi-assembly1.cif.gz_A | 1 | 283 | 45 | 351 | 0.5913 |
0.7362 |
| 1qgs-assembly1.cif.gz_A | 1 | 292 | 1 | 230 | 0.579 |
0.6946 |
| 1h7q-assembly1.cif.gz_A | 1 | 292 | 1 | 232 | 0.578 |
0.6916 |
| 1h7l-assembly1.cif.gz_A | 1 | 292 | 1 | 231 | 0.5767 |
0.6911 |
| 5vcm-assembly1.cif.gz_A | 1 | 295 | 27 | 333 | 0.5694 |
0.6513 |
| 5vcm-assembly2.cif.gz_B | 1 | 295 | 39 | 342 | 0.5667 |
0.6536 |
| 5vcr-assembly2.cif.gz_B | 1 | 295 | 31 | 328 | 0.5644 |
0.6394 |
| 5vcr-assembly1.cif.gz_A | 1 | 295 | 33 | 334 | 0.5629 |
0.6434 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q48215-F1-model_v4 | 1 | 313 | 1 | 260 | 0.5924 |
0.6727 |
| AF-Q46635-F1-model_v4 | 2 | 311 | 1 | 257 | 0.5919 |
0.6775 |
| AF-Q03084-F1-model_v4 | 1 | 308 | 6 | 261 | 0.5846 |
0.6823 |
| AF-A5U6W5-F1-model_v4 | 1 | 313 | 4 | 237 | 0.5813 |
0.7121 |
| AF-P47306-F1-model_v4 | 1 | 296 | 1 | 294 | 0.5801 |
0.6226 |
| AF-P39621-F1-model_v4 | 1 | 292 | 2 | 245 | 0.577 |
0.6804 |
| AF-Q11068-F1-model_v4 | 1 | 313 | 91 | 449 | 0.5721 |
0.684 |
| AF-Q9XGM8-F1-model_v4 | 1 | 282 | 104 | 406 | 0.5613 |
0.7361 |
| AF-P26572-F1-model_v4 | 1 | 282 | 104 | 408 | 0.5605 |
0.7359 |
| AF-Q09325-F1-model_v4 | 1 | 282 | 106 | 410 | 0.5602 |
0.7363 |