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Cluster: HRGMv2_1733_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1733_1 HRGMv2_1733_1_134 141779 142915 + GT4
TC HRGMv2_1733_1 HRGMv2_1733_1_135 142927 144276 + 9.B.18.1.3
peptidase HRGMv2_1733_1 HRGMv2_1733_1_136 144456 146168 + S15.UPW
pfam HRGMv2_1733_1 HRGMv2_1733_1_137 146298 147194 - EamA
CAZyme HRGMv2_1733_1 HRGMv2_1733_1_138 147294 148244 - GT2
pfam HRGMv2_1733_1 HRGMv2_1733_1_139 148271 149278 - Glyco_transf_10
pfam HRGMv2_1733_1 HRGMv2_1733_1_140 149375 150412 - ApbE
TC HRGMv2_1733_1 HRGMv2_1733_1_141 150424 151326 - 3.D.6.1.3
TC HRGMv2_1733_1 HRGMv2_1733_1_142 151467 152042 - 3.D.6.1.2
TC HRGMv2_1733_1 HRGMv2_1733_1_143 152079 152750 - 3.D.6.1.2
pfam HRGMv2_1733_1 HRGMv2_1733_1_144 152815 153390 - FMN_bind
TC HRGMv2_1733_1 HRGMv2_1733_1_145 153393 154346 - 3.D.6.1.2
Gene ID: HRGMv2_1733_1_134
Type: CAZyme
Location: 141779 - 142915 (+)
Gene ID: HRGMv2_1733_1_135
Type: TC
Location: 142927 - 144276 (+)
Gene ID: HRGMv2_1733_1_136
Type: peptidase
Location: 144456 - 146168 (+)
Gene ID: HRGMv2_1733_1_137
Type: pfam
Location: 146298 - 147194 (-)
Gene ID: HRGMv2_1733_1_138
Type: CAZyme
Location: 147294 - 148244 (-)
Gene ID: HRGMv2_1733_1_139
Type: pfam
Location: 148271 - 149278 (-)
Gene ID: HRGMv2_1733_1_140
Type: pfam
Location: 149375 - 150412 (-)
Gene ID: HRGMv2_1733_1_141
Type: TC
Location: 150424 - 151326 (-)
Gene ID: HRGMv2_1733_1_142
Type: TC
Location: 151467 - 152042 (-)
Gene ID: HRGMv2_1733_1_143
Type: TC
Location: 152079 - 152750 (-)
Gene ID: HRGMv2_1733_1_144
Type: pfam
Location: 152815 - 153390 (-)
Gene ID: HRGMv2_1733_1_145
Type: TC
Location: 153393 - 154346 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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