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Cluster: HRGMv2_1733_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1733_1 HRGMv2_1733_1_76 75781 76116 + 2.A.124.1.2
TC HRGMv2_1733_1 HRGMv2_1733_1_77 76140 76739 + 2.A.124.1.2
pfam HRGMv2_1733_1 HRGMv2_1733_1_78 76836 77540 + HEAT_EZ
sulfatase HRGMv2_1733_1 HRGMv2_1733_1_79 77674 79479 + S1_97
TC HRGMv2_1733_1 HRGMv2_1733_1_80 79902 82025 + 1.B.52.2.1
CAZyme HRGMv2_1733_1 HRGMv2_1733_1_81 82416 83378 - GT2
pfam HRGMv2_1733_1 HRGMv2_1733_1_82 83375 83845 - GtrA_DPMS_TM
CAZyme HRGMv2_1733_1 HRGMv2_1733_1_83 83842 84798 - GT2
STP HRGMv2_1733_1 HRGMv2_1733_1_84 84848 86038 - Aminotran_1_2
STP HRGMv2_1733_1 HRGMv2_1733_1_85 86134 86625 - CheW
CAZyme HRGMv2_1733_1 HRGMv2_1733_1_86 86831 87658 - GT8
Gene ID: HRGMv2_1733_1_76
Type: TC
Location: 75781 - 76116 (+)
Gene ID: HRGMv2_1733_1_77
Type: TC
Location: 76140 - 76739 (+)
Gene ID: HRGMv2_1733_1_78
Type: pfam
Location: 76836 - 77540 (+)
Gene ID: HRGMv2_1733_1_79
Type: sulfatase
Location: 77674 - 79479 (+)
Gene ID: HRGMv2_1733_1_80
Type: TC
Location: 79902 - 82025 (+)
Gene ID: HRGMv2_1733_1_81
Type: CAZyme
Location: 82416 - 83378 (-)
Gene ID: HRGMv2_1733_1_82
Type: pfam
Location: 83375 - 83845 (-)
Gene ID: HRGMv2_1733_1_83
Type: CAZyme
Location: 83842 - 84798 (-)
Gene ID: HRGMv2_1733_1_84
Type: STP
Location: 84848 - 86038 (-)
Gene ID: HRGMv2_1733_1_85
Type: STP
Location: 86134 - 86625 (-)
Gene ID: HRGMv2_1733_1_86
Type: CAZyme
Location: 86831 - 87658 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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