dbCAN HGM

Cluster: HRGMv2_1718_CGC1

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_1718_1	HRGMv2_1718_1_96	139341	140852	-	1.I.1.1.3
CAZyme	HRGMv2_1718_1	HRGMv2_1718_1_97	140914	142404	-	GT28
CAZyme	HRGMv2_1718_1	HRGMv2_1718_1_98	142623	143726	+	GT2
TC	HRGMv2_1718_1	HRGMv2_1718_1_99	144094	145020	+	2.A.7.3.62
CAZyme	HRGMv2_1718_1	HRGMv2_1718_1_100	145364	146677	+	GT2
CAZyme	HRGMv2_1718_1	HRGMv2_1718_1_101	146702	148822	+	GT2
CAZyme	HRGMv2_1718_1	HRGMv2_1718_1_102	148897	149883	-	GT2
CAZyme	HRGMv2_1718_1	HRGMv2_1718_1_103	150025	151029	+	GT2
NULL(UNKNOWN)	HRGMv2_1718_1	HRGMv2_1718_1_104	151121	152668	-	NULL(UNKNOWN) [View Structural Homologs]
CAZyme	HRGMv2_1718_1	HRGMv2_1718_1_105	152906	156199	+	CBM13 \| CBM13 \| CBM13 \| CBM13 \| GH73
CAZyme	HRGMv2_1718_1	HRGMv2_1718_1_106	156177	158870	+	CBM13 \| CBM13 \| CBM13 \| CBM13
CAZyme	HRGMv2_1718_1	HRGMv2_1718_1_107	158909	161605	+	CBM13 \| CBM13

Gene ID: HRGMv2_1718_1_96
Type: TC
Location: 139341 - 140852 (-)

Gene ID: HRGMv2_1718_1_97
Type: CAZyme
Location: 140914 - 142404 (-)

Gene ID: HRGMv2_1718_1_98
Type: CAZyme
Location: 142623 - 143726 (+)

Gene ID: HRGMv2_1718_1_99
Type: TC
Location: 144094 - 145020 (+)

Gene ID: HRGMv2_1718_1_100
Type: CAZyme
Location: 145364 - 146677 (+)

Gene ID: HRGMv2_1718_1_101
Type: CAZyme
Location: 146702 - 148822 (+)

Gene ID: HRGMv2_1718_1_102
Type: CAZyme
Location: 148897 - 149883 (-)

Gene ID: HRGMv2_1718_1_103
Type: CAZyme
Location: 150025 - 151029 (+)

Gene ID: HRGMv2_1718_1_104
Type:
Location: 151121 - 152668 (-)

Gene ID: HRGMv2_1718_1_105
Type: CAZyme
Location: 152906 - 156199 (+)

Gene ID: HRGMv2_1718_1_106
Type: CAZyme
Location: 156177 - 158870 (+)

Gene ID: HRGMv2_1718_1_107
Type: CAZyme
Location: 158909 - 161605 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.