PROTEIN: HRGMv2_1718_1_104
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Protein File & Metadata
Source:
HRGMv2_1718_1_104.pdb
Genome ID:
Protein ID:
HRGMv2_1718_1_104
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Protein Sequence
MIRNREGAHE RPAVSIPVYA LVTALLVACF LGVGVLNNAA AVYQGTSYDP SIRHYADHDQ 60 YARLADALLH GSVSLDLPVP DELAELENPY AFENRDAIQD GGNVPIFWDH AFYEGKYYCY 120 FGVVPAVLLY APYQLITGSW LATPAAVAFL GSCFLVCAAL LLYRVARRWF ARSATTGSLV 180 LALLCMFAGS NVVYLGFVPT FYSVPILTSM VFTMLGLWFW MGARREGGTS GAHGGVTLSA 240 WHLAAGSACM ALNLGCRPQF MLACFLALPL FWREITRERL LFSRAGLGST LAALVPFVVV 300 FAPLFAYNYV RFGSLLDFGS FYNLTGFDMI GYNQSWRLTP VLLFYYLIQP FNLSGSFPFV 360 QATDLTYPVS WAPFEPMYGG YFWLVPCALL VLALPVVRRE LKQRNLWGIS LLMLLFAAVV 420 LVADARTAGI TQRYFSDFGW YLMLVAAFVL FSLQARAGEK EEKGARNYRI LVVVLAVSLG 480 ISALVGLLSL FSPVHYASIA ALNPALYDAV AGLFG 515
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0EYW2-F1-model_v4 | 2 | 501 | 9 | 487 | 0.6316 |
0.6872 |
| AF-X8F0H0-F1-model_v4 | 1 | 501 | 18 | 502 | 0.6155 |
0.6734 |
| AF-K0EN63-F1-model_v4 | 16 | 506 | 1 | 528 | 0.5832 |
0.641 |
| AF-A0A5K4FC45-F1-model_v4 | 14 | 515 | 1 | 506 | 0.5728 |
0.6073 |
| AF-K0F1P6-F1-model_v4 | 8 | 507 | 14 | 479 | 0.571 |
0.6404 |
| AF-A0A0D2GY45-F1-model_v4 | 13 | 515 | 3 | 568 | 0.5644 |
0.6401 |
| AF-C1H855-F1-model_v4 | 14 | 515 | 1 | 557 | 0.5621 |
0.6283 |
| AF-C0NN31-F1-model_v4 | 13 | 515 | 1 | 559 | 0.5592 |
0.6251 |
| AF-A0A1D6GYC2-F1-model_v4 | 1 | 508 | 22 | 543 | 0.5576 |
0.6077 |
| AF-Q9USD4-F1-model_v4 | 11 | 515 | 1 | 460 | 0.5563 |
0.6507 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-K9U6Z6-F1-model_v4 | GT76 | 14 | 501 | 7 | 413 | 0.6725 |
0.7744 |
| A0A8E2H3U6 | GT39 | 6 | 514 | 1 | 412 | 0.6654 |
0.7612 |
| AF-A0A1S6H5E4-F1-model_v4 | GT39 | 14 | 511 | 1 | 401 | 0.6565 |
0.7635 |
| AF-A0A0N9HML6-F1-model_v4 | GT39 | 4 | 514 | 1 | 419 | 0.6553 |
0.7452 |
| AF-A0A1D8A3N3-F1-model_v4 | GT39 | 6 | 514 | 1 | 417 | 0.653 |
0.7448 |
| AF-A0A0G4B0Z3-F1-model_v4 | GT39 | 15 | 501 | 1 | 417 | 0.6522 |
0.7498 |
| AF-A0A7T8ABR8-F1-model_v4 | GT39 | 6 | 514 | 4 | 424 | 0.6457 |
0.7373 |
| AF-A0A097EGG7-F1-model_v4 | GT39 | 12 | 514 | 4 | 402 | 0.6414 |
0.747 |
| AF-A0A810NFR4-F1-model_v4 | GT39 | 1 | 508 | 11 | 497 | 0.6407 |
0.6904 |
| AF-A0A1B0ZHQ3-F1-model_v4 | GT39 | 1 | 507 | 11 | 513 | 0.6371 |
0.6756 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| K9U6Z6 | GT76 | 14 | 501 | 7 | 413 | 0.6725 |
0.7744 |
| A0A8E2H3U6 | GT39 | 6 | 514 | 1 | 412 | 0.6654 |
0.7612 |
| A0A1S6H5E4 | GT39 | 14 | 511 | 1 | 401 | 0.6565 |
0.7635 |
| QXE90561.1 | GT39 | 11 | 514 | 1 | 395 | 0.6527 |
0.7659 |
| A0A0G4B0Z3 | GT39 | 15 | 501 | 1 | 417 | 0.6522 |
0.7498 |
| A0A6F9WZW7 | GT39 | 9 | 511 | 6 | 412 | 0.6517 |
0.7584 |
| D1CEC5 | GT39 | 6 | 511 | 7 | 430 | 0.6466 |
0.7388 |
| A0A7T8ABR8 | GT39 | 6 | 514 | 4 | 424 | 0.6457 |
0.7373 |
| K0ZHU7 | GT39 | 12 | 511 | 4 | 468 | 0.6445 |
0.7064 |
| A0A9E9JV39 | GT39 | 5 | 514 | 1 | 390 | 0.642 |
0.7524 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3wak-assembly1.cif.gz_A | 10 | 511 | 4 | 703 | 0.4891 |
0.6317 |
| 6gxc-assembly1.cif.gz_A | 9 | 502 | 5 | 441 | 0.4775 |
0.6456 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9USD4-F1-model_v4 | 11 | 515 | 1 | 460 | 0.5563 |
0.6507 |
| AF-Q4IB63-F1-model_v4 | 6 | 508 | 5 | 583 | 0.5534 |
0.6279 |
| AF-Q6BH65-F1-model_v4 | 5 | 508 | 26 | 529 | 0.5473 |
0.5927 |
| AF-O34575-F1-model_v4 | 11 | 504 | 4 | 566 | 0.539 |
0.6583 |
| AF-Q2UH15-F1-model_v4 | 7 | 515 | 43 | 652 | 0.4996 |
0.5993 |