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Cluster: HRGMv2_1681_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1681_4 HRGMv2_1681_4_73 84469 84807 + 4.A.3.1.3
TF HRGMv2_1681_4 HRGMv2_1681_4_74 84985 85998 - LacI
TC HRGMv2_1681_4 HRGMv2_1681_4_75 86340 88097 + 4.A.3.1.1
CAZyme HRGMv2_1681_4 HRGMv2_1681_4_76 88190 89599 + GH1
TF HRGMv2_1681_4 HRGMv2_1681_4_77 89981 91027 - LacI
TC HRGMv2_1681_4 HRGMv2_1681_4_78 91416 93296 + 4.A.3.1.1
CAZyme HRGMv2_1681_4 HRGMv2_1681_4_79 93426 94856 + GH1
TC HRGMv2_1681_4 HRGMv2_1681_4_80 95071 95853 - 2.A.102.4.4
Gene ID: HRGMv2_1681_4_73
Type: TC
Location: 84469 - 84807 (+)
Gene ID: HRGMv2_1681_4_74
Type: TF
Location: 84985 - 85998 (-)
Gene ID: HRGMv2_1681_4_75
Type: TC
Location: 86340 - 88097 (+)
Gene ID: HRGMv2_1681_4_76
Type: CAZyme
Location: 88190 - 89599 (+)
Gene ID: HRGMv2_1681_4_77
Type: TF
Location: 89981 - 91027 (-)
Gene ID: HRGMv2_1681_4_78
Type: TC
Location: 91416 - 93296 (+)
Gene ID: HRGMv2_1681_4_79
Type: CAZyme
Location: 93426 - 94856 (+)
Gene ID: HRGMv2_1681_4_80
Type: TC
Location: 95071 - 95853 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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