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Cluster: HRGMv2_1679_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1679_1 HRGMv2_1679_1_578 695012 696472 - GH1
CAZyme HRGMv2_1679_1 HRGMv2_1679_1_579 696525 698012 - GH1
TC HRGMv2_1679_1 HRGMv2_1679_1_580 698059 699411 - 4.A.3.2.2
pfam HRGMv2_1679_1 HRGMv2_1679_1_581 699467 699787 - PTS_IIA
TC HRGMv2_1679_1 HRGMv2_1679_1_582 699780 700079 - 4.A.3.2.6
TF HRGMv2_1679_1 HRGMv2_1679_1_583 700329 701348 + LacI
TF HRGMv2_1679_1 HRGMv2_1679_1_584 701378 702115 - HTH_DeoR
TC HRGMv2_1679_1 HRGMv2_1679_1_585 702230 703528 - 4.A.1.2.11
pfam HRGMv2_1679_1 HRGMv2_1679_1_586 703605 704543 - AP_endonuc_2
pfam HRGMv2_1679_1 HRGMv2_1679_1_587 704926 705768 + Hydrolase | S6PP | Hydrolase_3
TC HRGMv2_1679_1 HRGMv2_1679_1_588 706153 708378 + 2.A.72.1.3
Gene ID: HRGMv2_1679_1_578
Type: CAZyme
Location: 695012 - 696472 (-)
Gene ID: HRGMv2_1679_1_579
Type: CAZyme
Location: 696525 - 698012 (-)
Gene ID: HRGMv2_1679_1_580
Type: TC
Location: 698059 - 699411 (-)
Gene ID: HRGMv2_1679_1_581
Type: pfam
Location: 699467 - 699787 (-)
Gene ID: HRGMv2_1679_1_582
Type: TC
Location: 699780 - 700079 (-)
Gene ID: HRGMv2_1679_1_583
Type: TF
Location: 700329 - 701348 (+)
Gene ID: HRGMv2_1679_1_584
Type: TF
Location: 701378 - 702115 (-)
Gene ID: HRGMv2_1679_1_585
Type: TC
Location: 702230 - 703528 (-)
Gene ID: HRGMv2_1679_1_586
Type: pfam
Location: 703605 - 704543 (-)
Gene ID: HRGMv2_1679_1_587
Type: pfam
Location: 704926 - 705768 (+)
Gene ID: HRGMv2_1679_1_588
Type: TC
Location: 706153 - 708378 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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