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Cluster: HRGMv2_1679_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1679_1 HRGMv2_1679_1_515 618595 621705 - 9.B.10.1.1
NULL(UNKNOWN) HRGMv2_1679_1 HRGMv2_1679_1_516 621786 624395 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1679_1 HRGMv2_1679_1_517 624481 628044 - GH25
pfam HRGMv2_1679_1 HRGMv2_1679_1_518 628292 629416 + Amino_oxidase | GLF | NAD_binding_8
CAZyme HRGMv2_1679_1 HRGMv2_1679_1_519 629660 630934 - GT4
CAZyme HRGMv2_1679_1 HRGMv2_1679_1_520 630938 632107 - GT2
CAZyme HRGMv2_1679_1 HRGMv2_1679_1_521 632104 633210 - GT2
TC HRGMv2_1679_1 HRGMv2_1679_1_522 633213 633995 - 3.A.1.103.1
TC HRGMv2_1679_1 HRGMv2_1679_1_523 634004 634825 - 3.A.1.103.6
Gene ID: HRGMv2_1679_1_515
Type: TC
Location: 618595 - 621705 (-)
Gene ID: HRGMv2_1679_1_516
Type:
Location: 621786 - 624395 (-)
Gene ID: HRGMv2_1679_1_517
Type: CAZyme
Location: 624481 - 628044 (-)
Gene ID: HRGMv2_1679_1_518
Type: pfam
Location: 628292 - 629416 (+)
Gene ID: HRGMv2_1679_1_519
Type: CAZyme
Location: 629660 - 630934 (-)
Gene ID: HRGMv2_1679_1_520
Type: CAZyme
Location: 630938 - 632107 (-)
Gene ID: HRGMv2_1679_1_521
Type: CAZyme
Location: 632104 - 633210 (-)
Gene ID: HRGMv2_1679_1_522
Type: TC
Location: 633213 - 633995 (-)
Gene ID: HRGMv2_1679_1_523
Type: TC
Location: 634004 - 634825 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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