dbCAN Logo

Cluster: HRGMv2_1679_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1679_2 HRGMv2_1679_2_145 190536 192143 + 4.A.1.1.8
CAZyme HRGMv2_1679_2 HRGMv2_1679_2_146 192291 193634 + GH4
NULL(UNKNOWN) HRGMv2_1679_2 HRGMv2_1679_2_147 193709 194341 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1679_2 HRGMv2_1679_2_148 195901 199485 + DEAD | Helicase_C | CarD_TRCF_RID | TRCF | ResIII | UvrB_inter
TC HRGMv2_1679_2 HRGMv2_1679_2_149 199968 200936 + 2.A.115.1.5
STP HRGMv2_1679_2 HRGMv2_1679_2_150 201256 201681 - TOBE | TOBE
TC HRGMv2_1679_2 HRGMv2_1679_2_151 202230 204398 + 2.A.16.2.2
pfam HRGMv2_1679_2 HRGMv2_1679_2_152 205268 206368 + Phosphonate-bd
TC HRGMv2_1679_2 HRGMv2_1679_2_153 206456 207490 + 3.A.1.9.1
TC HRGMv2_1679_2 HRGMv2_1679_2_154 207487 208314 + 3.A.1.9.1
TC HRGMv2_1679_2 HRGMv2_1679_2_155 208314 209195 + 3.A.1.9.2
Gene ID: HRGMv2_1679_2_145
Type: TC
Location: 190536 - 192143 (+)
Gene ID: HRGMv2_1679_2_146
Type: CAZyme
Location: 192291 - 193634 (+)
Gene ID: HRGMv2_1679_2_147
Type:
Location: 193709 - 194341 (+)
Gene ID: HRGMv2_1679_2_148
Type: pfam
Location: 195901 - 199485 (+)
Gene ID: HRGMv2_1679_2_149
Type: TC
Location: 199968 - 200936 (+)
Gene ID: HRGMv2_1679_2_150
Type: STP
Location: 201256 - 201681 (-)
Gene ID: HRGMv2_1679_2_151
Type: TC
Location: 202230 - 204398 (+)
Gene ID: HRGMv2_1679_2_152
Type: pfam
Location: 205268 - 206368 (+)
Gene ID: HRGMv2_1679_2_153
Type: TC
Location: 206456 - 207490 (+)
Gene ID: HRGMv2_1679_2_154
Type: TC
Location: 207487 - 208314 (+)
Gene ID: HRGMv2_1679_2_155
Type: TC
Location: 208314 - 209195 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List