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Cluster: HRGMv2_1679_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1679_2 HRGMv2_1679_2_85 111597 111917 + 4.A.3.2.1
TC HRGMv2_1679_2 HRGMv2_1679_2_86 111976 112275 + 4.A.3.2.4
NULL(UNKNOWN) HRGMv2_1679_2 HRGMv2_1679_2_87 112310 112891 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1679_2 HRGMv2_1679_2_88 112920 114260 + 4.A.3.2.3
CAZyme HRGMv2_1679_2 HRGMv2_1679_2_89 114388 115815 + GH1
pfam HRGMv2_1679_2 HRGMv2_1679_2_90 115912 116418 + MFS_1_like
pfam HRGMv2_1679_2 HRGMv2_1679_2_91 116419 117252 + MFS_1_like
TC HRGMv2_1679_2 HRGMv2_1679_2_92 117282 117599 - 2.A.7.1.4
STP HRGMv2_1679_2 HRGMv2_1679_2_93 118357 119715 - Pyr_redox_2
pfam HRGMv2_1679_2 HRGMv2_1679_2_94 120045 120938 + Aldose_epim
TC HRGMv2_1679_2 HRGMv2_1679_2_95 121139 122032 + 3.A.1.3.20
TC HRGMv2_1679_2 HRGMv2_1679_2_96 122045 123202 + 3.A.1.3.20
TC HRGMv2_1679_2 HRGMv2_1679_2_97 123213 123989 + 3.A.1.3.20
Gene ID: HRGMv2_1679_2_85
Type: TC
Location: 111597 - 111917 (+)
Gene ID: HRGMv2_1679_2_86
Type: TC
Location: 111976 - 112275 (+)
Gene ID: HRGMv2_1679_2_87
Type:
Location: 112310 - 112891 (+)
Gene ID: HRGMv2_1679_2_88
Type: TC
Location: 112920 - 114260 (+)
Gene ID: HRGMv2_1679_2_89
Type: CAZyme
Location: 114388 - 115815 (+)
Gene ID: HRGMv2_1679_2_90
Type: pfam
Location: 115912 - 116418 (+)
Gene ID: HRGMv2_1679_2_91
Type: pfam
Location: 116419 - 117252 (+)
Gene ID: HRGMv2_1679_2_92
Type: TC
Location: 117282 - 117599 (-)
Gene ID: HRGMv2_1679_2_93
Type: STP
Location: 118357 - 119715 (-)
Gene ID: HRGMv2_1679_2_94
Type: pfam
Location: 120045 - 120938 (+)
Gene ID: HRGMv2_1679_2_95
Type: TC
Location: 121139 - 122032 (+)
Gene ID: HRGMv2_1679_2_96
Type: TC
Location: 122045 - 123202 (+)
Gene ID: HRGMv2_1679_2_97
Type: TC
Location: 123213 - 123989 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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