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Cluster: HRGMv2_1679_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1679_1 HRGMv2_1679_1_607 734858 735694 - 3.A.1.132.3
NULL(UNKNOWN) HRGMv2_1679_1 HRGMv2_1679_1_608 735990 736643 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1679_1 HRGMv2_1679_1_609 736800 739049 - DEAD | Helicase_C | UVR | ResIII | UvrB | UvrB_inter
CAZyme HRGMv2_1679_1 HRGMv2_1679_1_610 739158 739745 - GH23
pfam HRGMv2_1679_1 HRGMv2_1679_1_611 739735 740379 - CoaE
TC HRGMv2_1679_1 HRGMv2_1679_1_612 740556 741755 - 2.A.1.2.15
pfam HRGMv2_1679_1 HRGMv2_1679_1_613 741926 743725 + TerB_N | TerB_C
pfam HRGMv2_1679_1 HRGMv2_1679_1_614 743715 745097 + BrxC_BrxD
TC HRGMv2_1679_1 HRGMv2_1679_1_615 745633 746472 - 3.A.1.15.11
TC HRGMv2_1679_1 HRGMv2_1679_1_616 746465 747187 - 3.A.1.15.11
TC HRGMv2_1679_1 HRGMv2_1679_1_617 747239 748222 - 3.A.1.15.11
Gene ID: HRGMv2_1679_1_607
Type: TC
Location: 734858 - 735694 (-)
Gene ID: HRGMv2_1679_1_608
Type:
Location: 735990 - 736643 (-)
Gene ID: HRGMv2_1679_1_609
Type: pfam
Location: 736800 - 739049 (-)
Gene ID: HRGMv2_1679_1_610
Type: CAZyme
Location: 739158 - 739745 (-)
Gene ID: HRGMv2_1679_1_611
Type: pfam
Location: 739735 - 740379 (-)
Gene ID: HRGMv2_1679_1_612
Type: TC
Location: 740556 - 741755 (-)
Gene ID: HRGMv2_1679_1_613
Type: pfam
Location: 741926 - 743725 (+)
Gene ID: HRGMv2_1679_1_614
Type: pfam
Location: 743715 - 745097 (+)
Gene ID: HRGMv2_1679_1_615
Type: TC
Location: 745633 - 746472 (-)
Gene ID: HRGMv2_1679_1_616
Type: TC
Location: 746465 - 747187 (-)
Gene ID: HRGMv2_1679_1_617
Type: TC
Location: 747239 - 748222 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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