dbCAN Logo

Cluster: HRGMv2_1675_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1675_28 HRGMv2_1675_28_5 4511 6139 + 3.A.1.5.27
TC HRGMv2_1675_28 HRGMv2_1675_28_6 6242 7258 + 3.A.1.5.38
TC HRGMv2_1675_28 HRGMv2_1675_28_7 7264 8163 + 3.A.1.5.38
TC HRGMv2_1675_28 HRGMv2_1675_28_8 8169 9149 + 3.A.1.5.35
TC HRGMv2_1675_28 HRGMv2_1675_28_9 9152 10264 + 3.A.1.5.20
NULL(UNKNOWN) HRGMv2_1675_28 HRGMv2_1675_28_10 10389 10682 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1675_28 HRGMv2_1675_28_11 10875 12083 + 3.A.3.6.14
peptidase HRGMv2_1675_28 HRGMv2_1675_28_12 11999 12955 - C59.951
CAZyme HRGMv2_1675_28 HRGMv2_1675_28_13 13491 15749 + GT35
Gene ID: HRGMv2_1675_28_5
Type: TC
Location: 4511 - 6139 (+)
Gene ID: HRGMv2_1675_28_6
Type: TC
Location: 6242 - 7258 (+)
Gene ID: HRGMv2_1675_28_7
Type: TC
Location: 7264 - 8163 (+)
Gene ID: HRGMv2_1675_28_8
Type: TC
Location: 8169 - 9149 (+)
Gene ID: HRGMv2_1675_28_9
Type: TC
Location: 9152 - 10264 (+)
Gene ID: HRGMv2_1675_28_10
Type:
Location: 10389 - 10682 (-)
Gene ID: HRGMv2_1675_28_11
Type: TC
Location: 10875 - 12083 (+)
Gene ID: HRGMv2_1675_28_12
Type: peptidase
Location: 11999 - 12955 (-)
Gene ID: HRGMv2_1675_28_13
Type: CAZyme
Location: 13491 - 15749 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List