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Cluster: HRGMv2_1675_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1675_18 HRGMv2_1675_18_15 17130 18722 + GH28
TC HRGMv2_1675_18 HRGMv2_1675_18_16 19636 21189 + 2.A.2.5.1
CAZyme HRGMv2_1675_18 HRGMv2_1675_18_17 21283 23424 + CE19 | CE8
pfam HRGMv2_1675_18 HRGMv2_1675_18_18 23424 24083 + Lipase_GDSL | Lipase_GDSL_2
CAZyme HRGMv2_1675_18 HRGMv2_1675_18_19 24126 25361 + GH105
Gene ID: HRGMv2_1675_18_15
Type: CAZyme
Location: 17130 - 18722 (+)
Gene ID: HRGMv2_1675_18_16
Type: TC
Location: 19636 - 21189 (+)
Gene ID: HRGMv2_1675_18_17
Type: CAZyme
Location: 21283 - 23424 (+)
Gene ID: HRGMv2_1675_18_18
Type: pfam
Location: 23424 - 24083 (+)
Gene ID: HRGMv2_1675_18_19
Type: CAZyme
Location: 24126 - 25361 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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