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Cluster: HRGMv2_1673_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1673_26 HRGMv2_1673_26_5 4035 5426 - 2.A.66.2.23
pfam HRGMv2_1673_26 HRGMv2_1673_26_6 5545 6591 - Glycos_transf_2
CAZyme HRGMv2_1673_26 HRGMv2_1673_26_7 6641 7654 - GT2
NULL(UNKNOWN) HRGMv2_1673_26 HRGMv2_1673_26_8 7647 9050 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1673_26 HRGMv2_1673_26_9 9047 10138 - GT4
pfam HRGMv2_1673_26 HRGMv2_1673_26_10 10128 11195 - Epimerase_2
pfam HRGMv2_1673_26 HRGMv2_1673_26_11 11273 12499 - UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_1673_26 HRGMv2_1673_26_12 12499 13266 - GT26
TC HRGMv2_1673_26 HRGMv2_1673_26_13 13286 13996 - 9.B.18.1.2
Gene ID: HRGMv2_1673_26_5
Type: TC
Location: 4035 - 5426 (-)
Gene ID: HRGMv2_1673_26_6
Type: pfam
Location: 5545 - 6591 (-)
Gene ID: HRGMv2_1673_26_7
Type: CAZyme
Location: 6641 - 7654 (-)
Gene ID: HRGMv2_1673_26_8
Type:
Location: 7647 - 9050 (-)
Gene ID: HRGMv2_1673_26_9
Type: CAZyme
Location: 9047 - 10138 (-)
Gene ID: HRGMv2_1673_26_10
Type: pfam
Location: 10128 - 11195 (-)
Gene ID: HRGMv2_1673_26_11
Type: pfam
Location: 11273 - 12499 (-)
Gene ID: HRGMv2_1673_26_12
Type: CAZyme
Location: 12499 - 13266 (-)
Gene ID: HRGMv2_1673_26_13
Type: TC
Location: 13286 - 13996 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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