PROTEIN: HRGMv2_1673_26_8
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_1673_26_8.pdb
Genome ID:
Protein ID:
HRGMv2_1673_26_8
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MTTMERTKGA SSMRVSGRMP SSRLQKGLSR FAVSDLFWLL AFNLLAFQIY FQEEVGGFFN 60 YLDELTSLLV LFITAVTLLF KLNEKGERPR GLALTLILLL CGITCGVVSN ALSGFDTQTR 120 AILTDIFTFC KFPLVIMCCA IFPKKSSGSH SFWRLLVLES QILIVVMVVC AGLNILFYGH 180 FLDMGSGFRY GIASFKFIFY HPEVVNLFTL GLIAILLIDK PSGHRVVILL GLLVMCLTLR 240 SKAMGFSAAV AIILLTMNKG RITPVQLLLG LFFAVLVANG QFSNYYESGE SARSLLTEGG 300 FAVAQDYFPL GSGFATFGSA VTGTEGNYSP LYYRFGYNNV WGLAPGYTFF ISDTFWPTVV 360 AQLGYVGAIC YIGAVGMTLK LIYDRYKKYG RDATVIIVLF YLVICTTATS AIFAPQWTYL 420 AFVFYLGMKH LVANENLAFA QEKNQEITRI KTVRRKFAVE KRGKHSA 467
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O25682-F1-model_v4 | 32 | 438 | 11 | 429 | 0.5984 |
0.6749 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A212QE91-F1-model_v4 | GT2 | 31 | 442 | 5 | 412 | 0.5242 |
0.7042 |
| AF-M1FGR5-F1-model_v4 | GT2 | 32 | 442 | 7 | 413 | 0.522 |
0.7041 |
| AF-A0A0K1UBS5-F1-model_v4 | GT2 | 32 | 442 | 6 | 412 | 0.5209 |
0.7006 |
| AF-E4PMS8-F1-model_v4 | GT2 | 32 | 443 | 6 | 412 | 0.5206 |
0.7005 |
| AF-A0A1D9GRK7-F1-model_v4 | GT2 | 32 | 443 | 1 | 407 | 0.5197 |
0.6975 |
| AF-G1FG65-F1-model_v4 | GT0 | 31 | 432 | 17 | 426 | 0.5187 |
0.6764 |
| AF-A0A3Q9NIF5-F1-model_v4 | GT2 | 31 | 446 | 2 | 414 | 0.5176 |
0.6865 |
| AF-A0A346S464-F1-model_v4 | GT2 | 31 | 443 | 5 | 412 | 0.5168 |
0.6935 |
| AF-A0A6C0U049-F1-model_v4 | GT2 | 31 | 446 | 5 | 417 | 0.5151 |
0.6842 |
| QSP96058.1 | GT2 | 31 | 446 | 8 | 421 | 0.514 |
0.6838 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QSP96058.1 | GT2 | 31 | 446 | 8 | 421 | 0.514 |
0.6838 |
| D5MJ04 | GT9 | 31 | 467 | 23 | 765 | 0.4959 |
0.6617 |
| A0A9Q9IL13 | GT4 | 32 | 450 | 20 | 891 | 0.4946 |
0.7297 |
| WBY01952.1 | GT9 | 31 | 450 | 16 | 564 | 0.4803 |
0.6607 |
| A0A517MXC4 | GT26 | 31 | 435 | 15 | 444 | 0.4795 |
0.674 |
| UII34295.1 | GT4 | 31 | 440 | 16 | 421 | 0.4485 |
0.6366 |
| A0A7S8IC57 | GH39 | 28 | 435 | 556 | 1038 | 0.4384 |
0.6826 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q00474-F1-model_v4 | 55 | 445 | 3 | 399 | 0.6151 |
0.6931 |