Cluster: HRGMv2_1650_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1650
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1650_7 | HRGMv2_1650_7_52 | 52781 | 55456 | - | 3.A.3.2.21 |
| pfam | HRGMv2_1650_7 | HRGMv2_1650_7_53 | 55755 | 56756 | + | 2-Hacid_dh | 2-Hacid_dh_C |
| pfam | HRGMv2_1650_7 | HRGMv2_1650_7_54 | 56809 | 58257 | + | PK | PK_C |
| CAZyme | HRGMv2_1650_7 | HRGMv2_1650_7_55 | 58567 | 59916 | - | GH13_20 |
Gene ID: HRGMv2_1650_7_52
Type: TC
Location: 52781 - 55456 (-)
Type: TC
Location: 52781 - 55456 (-)
Gene ID: HRGMv2_1650_7_53
Type: pfam
Location: 55755 - 56756 (+)
Type: pfam
Location: 55755 - 56756 (+)
Gene ID: HRGMv2_1650_7_54
Type: pfam
Location: 56809 - 58257 (+)
Type: pfam
Location: 56809 - 58257 (+)
Gene ID: HRGMv2_1650_7_55
Type: CAZyme
Location: 58567 - 59916 (-)
Type: CAZyme
Location: 58567 - 59916 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Thermophilibacter
Species
Thermophilibacter avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.