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Cluster: HRGMv2_1577_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1577_1 HRGMv2_1577_1_121 114680 116140 - 2.A.66.2.2
CAZyme HRGMv2_1577_1 HRGMv2_1577_1_122 116147 117127 - GT2
NULL(UNKNOWN) HRGMv2_1577_1 HRGMv2_1577_1_123 117130 118386 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1577_1 HRGMv2_1577_1_124 118388 119458 - GT4
pfam HRGMv2_1577_1 HRGMv2_1577_1_125 119455 120351 - ATPgrasp_TupA
CAZyme HRGMv2_1577_1 HRGMv2_1577_1_126 120348 120839 - GT1
pfam HRGMv2_1577_1 HRGMv2_1577_1_127 120852 121325 - Alg14
pfam HRGMv2_1577_1 HRGMv2_1577_1_128 121329 122588 - UDPG_MGDP_dh | NAD_Gly3P_dh_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
TC HRGMv2_1577_1 HRGMv2_1577_1_129 122627 123376 - 9.B.18.1.2
Gene ID: HRGMv2_1577_1_121
Type: TC
Location: 114680 - 116140 (-)
Gene ID: HRGMv2_1577_1_122
Type: CAZyme
Location: 116147 - 117127 (-)
Gene ID: HRGMv2_1577_1_123
Type:
Location: 117130 - 118386 (-)
Gene ID: HRGMv2_1577_1_124
Type: CAZyme
Location: 118388 - 119458 (-)
Gene ID: HRGMv2_1577_1_125
Type: pfam
Location: 119455 - 120351 (-)
Gene ID: HRGMv2_1577_1_126
Type: CAZyme
Location: 120348 - 120839 (-)
Gene ID: HRGMv2_1577_1_127
Type: pfam
Location: 120852 - 121325 (-)
Gene ID: HRGMv2_1577_1_128
Type: pfam
Location: 121329 - 122588 (-)
Gene ID: HRGMv2_1577_1_129
Type: TC
Location: 122627 - 123376 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1577_1_128 vegan > omnivore 1.11551 0.01882

🧭 Explore Read Mapping of CGC

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