PROTEIN: HRGMv2_1577_1_123
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Protein File & Metadata
Source:
HRGMv2_1577_1_123.pdb
Genome ID:
Protein ID:
HRGMv2_1577_1_123
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Protein Sequence
MEHNKFLNLT LSELGVLFAL NLLFFSQFLQ QQSEIFSYCD EVITIIFLVA AILAAATDDA 60 HCLSKGESIA IVLFVIFIAI GFVSSSFVNL GISLVAQAID LFACVKFFLI YFSALVLFSL 120 QTDDFCQKVK RWAIAEAKLL VVVMFLCALV NLSFDIGMSA EGERYGVRSF SFIFYHPTIV 180 NFVVVGLVAL LLGNEVKNRL YIWMALAVML LTLRTKAFVF VAVYVLIQLM VKAGKKAGFL 240 TILTVVLIAV LIGWDQFAAY QETGEARGEL LRTSFAIANE SFPLGSGFAS FASNVTAQPE 300 YYSPLYYKYG INLIYGLGFV HTHYLSDTFW PIVIAQFGYI GLVILSLSLY YLFRSAAHRQ 360 RALNIRVLVP VLLYLLISST SESSIFNPMA VYLGLCLALM LAGKPSGPLR NKQLEMEN 418
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O25682-F1-model_v4 | 9 | 409 | 8 | 429 | 0.6567 |
0.7139 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A212QE91-F1-model_v4 | GT2 | 7 | 418 | 3 | 575 | 0.594 |
0.7494 |
| AF-M1FGR5-F1-model_v4 | GT2 | 7 | 418 | 4 | 576 | 0.5903 |
0.7462 |
| AF-A0A0K1UBS5-F1-model_v4 | GT2 | 7 | 418 | 3 | 575 | 0.5889 |
0.743 |
| AF-E4PMS8-F1-model_v4 | GT2 | 7 | 418 | 3 | 575 | 0.5864 |
0.7399 |
| AF-A0A3Q9NIF5-F1-model_v4 | GT2 | 7 | 418 | 3 | 574 | 0.584 |
0.7354 |
| AF-A0A1D9GRK7-F1-model_v4 | GT2 | 10 | 418 | 1 | 570 | 0.5833 |
0.7387 |
| AF-A0A346S464-F1-model_v4 | GT2 | 6 | 418 | 2 | 575 | 0.5799 |
0.7306 |
| AF-A0A6C0U049-F1-model_v4 | GT2 | 7 | 418 | 6 | 577 | 0.576 |
0.7273 |
| QSP96058.1 | GT2 | 8 | 418 | 10 | 581 | 0.5747 |
0.7283 |
| WBY01952.1 | GT9 | 8 | 418 | 14 | 513 | 0.5514 |
0.7312 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QSP96058.1 | GT2 | 8 | 418 | 10 | 581 | 0.5747 |
0.7283 |
| WBY01952.1 | GT9 | 8 | 418 | 14 | 513 | 0.5514 |
0.7312 |
| D5MJ04 | GT9 | 9 | 418 | 23 | 524 | 0.537 |
0.7148 |
| H8L3P3 | GT2 | 1 | 418 | 4 | 399 | 0.5361 |
0.7274 |
| B5YD26 | GT9 | 10 | 414 | 43 | 476 | 0.5354 |
0.7223 |
| UII34295.1 | GT4 | 8 | 418 | 14 | 509 | 0.5183 |
0.6913 |
| D9S8K7 | GT4 | 9 | 416 | 14 | 789 | 0.5166 |
0.6955 |
| B8IGI7 | GH16_7 | 9 | 415 | 18 | 461 | 0.5154 |
0.709 |
| A0A5B7R2V6 | GH5_39 | 10 | 410 | 384 | 792 | 0.499 |
0.6877 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37784-F1-model_v4 | 9 | 414 | 2 | 378 | 0.6858 |
0.7503 |
| AF-Q00474-F1-model_v4 | 30 | 406 | 2 | 393 | 0.6556 |
0.727 |