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Cluster: HRGMv2_1557_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1557_16 HRGMv2_1557_16_10 13685 15367 + 2.A.66.4.4
pfam HRGMv2_1557_16 HRGMv2_1557_16_11 15374 17329 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1557_16 HRGMv2_1557_16_12 17678 19291 + 3.A.1.5.27
TC HRGMv2_1557_16 HRGMv2_1557_16_13 19449 20405 + 3.A.1.5.38
TC HRGMv2_1557_16 HRGMv2_1557_16_14 20409 22424 + 3.A.1.5.25
TC HRGMv2_1557_16 HRGMv2_1557_16_15 22425 23252 + 3.A.1.5.27
CAZyme HRGMv2_1557_16 HRGMv2_1557_16_16 23384 24310 + CE7
Gene ID: HRGMv2_1557_16_10
Type: TC
Location: 13685 - 15367 (+)
Gene ID: HRGMv2_1557_16_11
Type: pfam
Location: 15374 - 17329 (+)
Gene ID: HRGMv2_1557_16_12
Type: TC
Location: 17678 - 19291 (+)
Gene ID: HRGMv2_1557_16_13
Type: TC
Location: 19449 - 20405 (+)
Gene ID: HRGMv2_1557_16_14
Type: TC
Location: 20409 - 22424 (+)
Gene ID: HRGMv2_1557_16_15
Type: TC
Location: 22425 - 23252 (+)
Gene ID: HRGMv2_1557_16_16
Type: CAZyme
Location: 23384 - 24310 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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