dbCAN Logo

Cluster: HRGMv2_1533_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1533_45 HRGMv2_1533_45_2 489 1865 - 3.A.1.17.10
NULL(UNKNOWN) HRGMv2_1533_45 HRGMv2_1533_45_3 1869 2924 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1533_45 HRGMv2_1533_45_4 2927 4738 - 3.D.1.5.1
STP HRGMv2_1533_45 HRGMv2_1533_45_5 4732 6564 - Pyr_redox_2
CAZyme HRGMv2_1533_45 HRGMv2_1533_45_6 6823 8205 - GH4
TC HRGMv2_1533_45 HRGMv2_1533_45_7 8209 9825 - 4.A.1.1.3
pfam HRGMv2_1533_45 HRGMv2_1533_45_8 9925 10779 - PRD | PRD | CAT_RBD
TC HRGMv2_1533_45 HRGMv2_1533_45_9 10798 11310 - 4.A.1.2.5
Gene ID: HRGMv2_1533_45_2
Type: TC
Location: 489 - 1865 (-)
Gene ID: HRGMv2_1533_45_3
Type:
Location: 1869 - 2924 (-)
Gene ID: HRGMv2_1533_45_4
Type: TC
Location: 2927 - 4738 (-)
Gene ID: HRGMv2_1533_45_5
Type: STP
Location: 4732 - 6564 (-)
Gene ID: HRGMv2_1533_45_6
Type: CAZyme
Location: 6823 - 8205 (-)
Gene ID: HRGMv2_1533_45_7
Type: TC
Location: 8209 - 9825 (-)
Gene ID: HRGMv2_1533_45_8
Type: pfam
Location: 9925 - 10779 (-)
Gene ID: HRGMv2_1533_45_9
Type: TC
Location: 10798 - 11310 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List