dbCAN Logo

PROTEIN: HRGMv2_1533_45_3

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_1533_45_3.pdb
Genome ID:
HRGMv2_1533
Protein ID:
HRGMv2_1533_45_3

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MRAFDFEMSR   RGFASALAAG   ALSLALAGCG   GGAAGAGSAA   DSAATDGAGA   AAEPVAVHVA 60
SLKGPTSIGL   VQFMDQAADG   ETDNEFDFAI   NTAADEIVPK   VIQGDIDIAL   VPANVASVLY 120
NKTEGAVQVI   DINTLGVLNV   VTGNADVTSF   GDLAGRTAYM   TGKGTTPEYV   MNYLLERAGL 180
TGQVTLEFKS   EPTEVLSALL   ADPSAVGVLP   EPFKTAAIAK   SEGKLSAPVS   LTDVWDELAG 240
DTGSRLLTGV   TVVRRAFAEE   HPEAVAEFLS   CHAASVKAVN   AAPADWAQAV   VDAGIVDNAK 300
IAEKAIPGCM   LVCQTGKDMK   AALSGYLQVL   FDADASAVGG   KLPADDFYYL   E 351
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q5F6W2-F1-model_v4 53 350 28 325 0.7471 0.8607
AF-A0A0H3GP99-F1-model_v4 45 351 17 318 0.7096 0.8118
AF-A0A0H3GZA9-F1-model_v4 52 351 25 310 0.7085 0.843
AF-Q9I0P2-F1-model_v4 50 351 19 306 0.7082 0.8355
AF-A0A0D2GYL1-F1-model_v4 54 351 1 295 0.7022 0.8032
AF-U7PRE8-F1-model_v4 50 351 12 321 0.6884 0.7911
AF-A0A0H3GR32-F1-model_v4 51 351 46 344 0.6872 0.8131
AF-U7Q5Y8-F1-model_v4 49 351 2 317 0.6855 0.7873
AF-U7PXF6-F1-model_v4 54 351 1 294 0.6818 0.8055
AF-Q9I0N8-F1-model_v4 52 351 24 308 0.6804 0.8057
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A1C7H7G1-F1-model_v4 GH23 52 301 37 443 0.4323 0.6696
AF-A0A1Y4PH24-F1-model_v4 GH23 26 301 21 443 0.4302 0.6129
AF-D6D3U4-F1-model_v4 GH23 52 301 40 446 0.4298 0.6674
AF-E6SPV9-F1-model_v4 GH23 24 301 22 443 0.4294 0.6084
AF-F7LTV0-F1-model_v4 GH23 52 301 37 443 0.4285 0.6637
AF-A0A0P0ETY4-F1-model_v4 GH23 52 301 44 449 0.4284 0.6682
A0A975KCS4 GH23 49 302 43 339 0.4269 0.6596
AF-E1WT20-F1-model_v4 GH23 52 301 37 443 0.4267 0.6616
AF-L0RFS4-F1-model_v4 GH23 34 304 5 451 0.4266 0.6221
AF-A0A0K6BW89-F1-model_v4 GH23 51 301 37 442 0.4251 0.6566
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A975KCS4 GH23 49 302 43 339 0.4269 0.6596
C6BRT1 GH23 41 304 31 474 0.4217 0.6381
E1YCM4 GH23 25 304 11 447 0.4191 0.592
A0A2D2N719 GH23 31 301 67 502 0.4148 0.6298
A8ZWR8 GH23 23 304 10 450 0.4137 0.5742
UZP75243.1 GH23 18 304 9 441 0.4086 0.566
A0A6I6K4Y9 GH23 52 299 48 299 0.4081 0.641
A0A6C0GKB0 GH23 13 298 45 306 0.4064 0.6149
F3Z2E8 GH23 55 304 43 459 0.4063 0.6378
A0A1Y3Y3U2 GH23 52 299 37 282 0.4061 0.6352
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3hn0-assembly1.cif.gz_A 54 351 1 279 0.788 0.8942
2x26-assembly2.cif.gz_B 53 350 1 286 0.7321 0.8341
2x26-assembly1.cif.gz_A 53 351 1 287 0.7141 0.8328
3un6-assembly1.cif.gz_A 54 351 1 283 0.6827 0.7875
3uif-assembly1.cif.gz_A 52 351 2 307 0.6762 0.7838
3ksx-assembly1.cif.gz_A 52 351 1 289 0.6645 0.7527
7ahr-assembly1.cif.gz_A 54 351 5 280 0.6604 0.7712
7an6-assembly1.cif.gz_B 54 351 5 282 0.654 0.7584
6st1-assembly2.cif.gz_B 56 351 1 295 0.6534 0.737
7an9-assembly1.cif.gz_B 55 351 1 277 0.6523 0.7525
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-C0SP84-F1-model_v4 52 351 28 325 0.6911 0.8083
AF-A9WGD2-F1-model_v4 52 351 42 344 0.6758 0.8036
AF-Q9KXN1-F1-model_v4 53 351 1 282 0.6717 0.7685
AF-P75853-F1-model_v4 45 351 15 311 0.6626 0.7654
AF-Q8FUN4-F1-model_v4 50 351 19 317 0.6431 0.7386
AF-Q576E1-F1-model_v4 50 351 19 317 0.6375 0.7327
AF-Q5ZV75-F1-model_v4 53 351 5 297 0.636 0.7424
AF-Q2YJB6-F1-model_v4 50 351 19 317 0.6354 0.7303
AF-Q47537-F1-model_v4 53 351 20 317 0.6353 0.7339
AF-Q8YDR6-F1-model_v4 50 351 19 317 0.6345 0.7295
Download Full SwissProt Results