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Cluster: HRGMv2_1515_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1515_1 HRGMv2_1515_1_306 344786 346144 - 2.A.33.1.1
pfam HRGMv2_1515_1 HRGMv2_1515_1_307 346412 347335 - DHH | DHHA2
STP HRGMv2_1515_1 HRGMv2_1515_1_308 347502 348455 - Glucokinase
TC HRGMv2_1515_1 HRGMv2_1515_1_309 348697 349029 - 4.A.3.2.3
TC HRGMv2_1515_1 HRGMv2_1515_1_310 349039 349341 - 4.A.3.2.9
TC HRGMv2_1515_1 HRGMv2_1515_1_311 349503 350846 - 4.A.3.2.9
CAZyme HRGMv2_1515_1 HRGMv2_1515_1_312 350967 352367 - GH1
Gene ID: HRGMv2_1515_1_306
Type: TC
Location: 344786 - 346144 (-)
Gene ID: HRGMv2_1515_1_307
Type: pfam
Location: 346412 - 347335 (-)
Gene ID: HRGMv2_1515_1_308
Type: STP
Location: 347502 - 348455 (-)
Gene ID: HRGMv2_1515_1_309
Type: TC
Location: 348697 - 349029 (-)
Gene ID: HRGMv2_1515_1_310
Type: TC
Location: 349039 - 349341 (-)
Gene ID: HRGMv2_1515_1_311
Type: TC
Location: 349503 - 350846 (-)
Gene ID: HRGMv2_1515_1_312
Type: CAZyme
Location: 350967 - 352367 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1515_1_310 vegan > omnivore 1.02509 0.00566

🧭 Explore Read Mapping of CGC

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