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Cluster: HRGMv2_1515_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1515_1 HRGMv2_1515_1_256 294116 294454 - 4.A.3.1.2
TF HRGMv2_1515_1 HRGMv2_1515_1_257 294669 295673 - LacI
TC HRGMv2_1515_1 HRGMv2_1515_1_258 296031 297806 + 4.A.3.1.1
CAZyme HRGMv2_1515_1 HRGMv2_1515_1_259 297873 299312 + GH1
TF HRGMv2_1515_1 HRGMv2_1515_1_260 299422 300432 - LacI
TC HRGMv2_1515_1 HRGMv2_1515_1_261 300708 302465 + 4.A.3.1.1
CAZyme HRGMv2_1515_1 HRGMv2_1515_1_262 302542 303963 + GH1
Gene ID: HRGMv2_1515_1_256
Type: TC
Location: 294116 - 294454 (-)
Gene ID: HRGMv2_1515_1_257
Type: TF
Location: 294669 - 295673 (-)
Gene ID: HRGMv2_1515_1_258
Type: TC
Location: 296031 - 297806 (+)
Gene ID: HRGMv2_1515_1_259
Type: CAZyme
Location: 297873 - 299312 (+)
Gene ID: HRGMv2_1515_1_260
Type: TF
Location: 299422 - 300432 (-)
Gene ID: HRGMv2_1515_1_261
Type: TC
Location: 300708 - 302465 (+)
Gene ID: HRGMv2_1515_1_262
Type: CAZyme
Location: 302542 - 303963 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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