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Cluster: HRGMv2_1515_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1515_16 HRGMv2_1515_16_19 21803 22729 - CE7
TC HRGMv2_1515_16 HRGMv2_1515_16_20 22861 23688 - 3.A.1.5.27
TC HRGMv2_1515_16 HRGMv2_1515_16_21 23689 25704 - 3.A.1.5.25
TC HRGMv2_1515_16 HRGMv2_1515_16_22 25708 26664 - 3.A.1.5.38
TC HRGMv2_1515_16 HRGMv2_1515_16_23 26820 28433 - 3.A.1.5.27
pfam HRGMv2_1515_16 HRGMv2_1515_16_24 28799 30739 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1515_16 HRGMv2_1515_16_25 30746 33049 - 2.A.66.4.4
Gene ID: HRGMv2_1515_16_19
Type: CAZyme
Location: 21803 - 22729 (-)
Gene ID: HRGMv2_1515_16_20
Type: TC
Location: 22861 - 23688 (-)
Gene ID: HRGMv2_1515_16_21
Type: TC
Location: 23689 - 25704 (-)
Gene ID: HRGMv2_1515_16_22
Type: TC
Location: 25708 - 26664 (-)
Gene ID: HRGMv2_1515_16_23
Type: TC
Location: 26820 - 28433 (-)
Gene ID: HRGMv2_1515_16_24
Type: pfam
Location: 28799 - 30739 (-)
Gene ID: HRGMv2_1515_16_25
Type: TC
Location: 30746 - 33049 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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