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Cluster: HRGMv2_1515_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1515_12 HRGMv2_1515_12_19 18092 19597 + GH77
CAZyme HRGMv2_1515_12 HRGMv2_1515_12_20 19727 21994 + GT35
TC HRGMv2_1515_12 HRGMv2_1515_12_21 22531 23730 - 3.A.1.1.22
TC HRGMv2_1515_12 HRGMv2_1515_12_22 23799 24638 - 3.A.1.1.45
TC HRGMv2_1515_12 HRGMv2_1515_12_23 24638 25492 - 3.A.1.1.45
TC HRGMv2_1515_12 HRGMv2_1515_12_24 25580 26896 - 3.A.1.1.45
TF HRGMv2_1515_12 HRGMv2_1515_12_25 27203 27922 - GntR
TC HRGMv2_1515_12 HRGMv2_1515_12_26 28185 30602 + 4.A.1.1.8
Gene ID: HRGMv2_1515_12_19
Type: CAZyme
Location: 18092 - 19597 (+)
Gene ID: HRGMv2_1515_12_20
Type: CAZyme
Location: 19727 - 21994 (+)
Gene ID: HRGMv2_1515_12_21
Type: TC
Location: 22531 - 23730 (-)
Gene ID: HRGMv2_1515_12_22
Type: TC
Location: 23799 - 24638 (-)
Gene ID: HRGMv2_1515_12_23
Type: TC
Location: 24638 - 25492 (-)
Gene ID: HRGMv2_1515_12_24
Type: TC
Location: 25580 - 26896 (-)
Gene ID: HRGMv2_1515_12_25
Type: TF
Location: 27203 - 27922 (-)
Gene ID: HRGMv2_1515_12_26
Type: TC
Location: 28185 - 30602 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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