dbCAN Logo

Cluster: HRGMv2_1504_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1504_3 HRGMv2_1504_3_39 44767 45210 + 4.A.6.1.16
pfam HRGMv2_1504_3 HRGMv2_1504_3_40 45210 45491 + YajC
TC HRGMv2_1504_3 HRGMv2_1504_3_41 45528 46010 + 4.A.6.1.4
TC HRGMv2_1504_3 HRGMv2_1504_3_42 46101 46901 + 4.A.6.1.4
TC HRGMv2_1504_3 HRGMv2_1504_3_43 46891 47973 + 4.A.6.1.4
TF HRGMv2_1504_3 HRGMv2_1504_3_44 48158 48889 + GntR
STP HRGMv2_1504_3 HRGMv2_1504_3_45 49004 50170 + SIS | SIS
CAZyme HRGMv2_1504_3 HRGMv2_1504_3_46 50289 51458 + CE9
Gene ID: HRGMv2_1504_3_39
Type: TC
Location: 44767 - 45210 (+)
Gene ID: HRGMv2_1504_3_40
Type: pfam
Location: 45210 - 45491 (+)
Gene ID: HRGMv2_1504_3_41
Type: TC
Location: 45528 - 46010 (+)
Gene ID: HRGMv2_1504_3_42
Type: TC
Location: 46101 - 46901 (+)
Gene ID: HRGMv2_1504_3_43
Type: TC
Location: 46891 - 47973 (+)
Gene ID: HRGMv2_1504_3_44
Type: TF
Location: 48158 - 48889 (+)
Gene ID: HRGMv2_1504_3_45
Type: STP
Location: 49004 - 50170 (+)
Gene ID: HRGMv2_1504_3_46
Type: CAZyme
Location: 50289 - 51458 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List