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Cluster: HRGMv2_1504_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1504_22 HRGMv2_1504_22_17 16609 17535 - CE7
TC HRGMv2_1504_22 HRGMv2_1504_22_18 17667 18494 - 3.A.1.5.27
TC HRGMv2_1504_22 HRGMv2_1504_22_19 18495 20510 - 3.A.1.5.25
TC HRGMv2_1504_22 HRGMv2_1504_22_20 20514 21470 - 3.A.1.5.38
TC HRGMv2_1504_22 HRGMv2_1504_22_21 21628 23241 - 3.A.1.5.27
pfam HRGMv2_1504_22 HRGMv2_1504_22_22 23607 25547 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1504_22 HRGMv2_1504_22_23 25554 27236 - 2.A.66.4.4
Gene ID: HRGMv2_1504_22_17
Type: CAZyme
Location: 16609 - 17535 (-)
Gene ID: HRGMv2_1504_22_18
Type: TC
Location: 17667 - 18494 (-)
Gene ID: HRGMv2_1504_22_19
Type: TC
Location: 18495 - 20510 (-)
Gene ID: HRGMv2_1504_22_20
Type: TC
Location: 20514 - 21470 (-)
Gene ID: HRGMv2_1504_22_21
Type: TC
Location: 21628 - 23241 (-)
Gene ID: HRGMv2_1504_22_22
Type: pfam
Location: 23607 - 25547 (-)
Gene ID: HRGMv2_1504_22_23
Type: TC
Location: 25554 - 27236 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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