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Cluster: HRGMv2_1488_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1488_11 HRGMv2_1488_11_33 38134 40473 - 3.A.3.5.15
STP HRGMv2_1488_11 HRGMv2_1488_11_34 40887 42971 - Pkinase
STP HRGMv2_1488_11 HRGMv2_1488_11_35 43143 44105 - FHA
TC HRGMv2_1488_11 HRGMv2_1488_11_36 44615 46876 + 1.I.1.1.3
TC HRGMv2_1488_11 HRGMv2_1488_11_37 47253 47765 + 4.A.1.2.5
pfam HRGMv2_1488_11 HRGMv2_1488_11_38 47772 48638 + PRD | PRD | CAT_RBD
TC HRGMv2_1488_11 HRGMv2_1488_11_39 48738 50354 + 4.A.1.1.3
CAZyme HRGMv2_1488_11 HRGMv2_1488_11_40 50358 51740 + GH4
STP HRGMv2_1488_11 HRGMv2_1488_11_41 51997 53829 + Pyr_redox_2
TC HRGMv2_1488_11 HRGMv2_1488_11_42 53823 55634 + 3.D.1.5.1
NULL(UNKNOWN) HRGMv2_1488_11 HRGMv2_1488_11_43 55637 56692 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1488_11 HRGMv2_1488_11_44 56696 58072 + 3.A.1.17.10
Gene ID: HRGMv2_1488_11_33
Type: TC
Location: 38134 - 40473 (-)
Gene ID: HRGMv2_1488_11_34
Type: STP
Location: 40887 - 42971 (-)
Gene ID: HRGMv2_1488_11_35
Type: STP
Location: 43143 - 44105 (-)
Gene ID: HRGMv2_1488_11_36
Type: TC
Location: 44615 - 46876 (+)
Gene ID: HRGMv2_1488_11_37
Type: TC
Location: 47253 - 47765 (+)
Gene ID: HRGMv2_1488_11_38
Type: pfam
Location: 47772 - 48638 (+)
Gene ID: HRGMv2_1488_11_39
Type: TC
Location: 48738 - 50354 (+)
Gene ID: HRGMv2_1488_11_40
Type: CAZyme
Location: 50358 - 51740 (+)
Gene ID: HRGMv2_1488_11_41
Type: STP
Location: 51997 - 53829 (+)
Gene ID: HRGMv2_1488_11_42
Type: TC
Location: 53823 - 55634 (+)
Gene ID: HRGMv2_1488_11_43
Type:
Location: 55637 - 56692 (+)
Gene ID: HRGMv2_1488_11_44
Type: TC
Location: 56696 - 58072 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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