dbCAN Logo

Cluster: HRGMv2_1486_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1486_21 HRGMv2_1486_21_6 6845 7675 - 3.A.1.132.3
pfam HRGMv2_1486_21 HRGMv2_1486_21_7 7935 10814 + UvrA_DNA-bind | UvrA_inter
pfam HRGMv2_1486_21 HRGMv2_1486_21_8 10949 11449 + tRNA_edit
TC HRGMv2_1486_21 HRGMv2_1486_21_9 11453 13756 + 2.A.66.4.4
pfam HRGMv2_1486_21 HRGMv2_1486_21_10 13763 15703 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1486_21 HRGMv2_1486_21_11 16069 17682 + 3.A.1.5.27
TC HRGMv2_1486_21 HRGMv2_1486_21_12 17840 18796 + 3.A.1.5.38
TC HRGMv2_1486_21 HRGMv2_1486_21_13 18800 20815 + 3.A.1.5.25
TC HRGMv2_1486_21 HRGMv2_1486_21_14 20816 21643 + 3.A.1.5.27
CAZyme HRGMv2_1486_21 HRGMv2_1486_21_15 21775 22701 + CE7
Gene ID: HRGMv2_1486_21_6
Type: TC
Location: 6845 - 7675 (-)
Gene ID: HRGMv2_1486_21_7
Type: pfam
Location: 7935 - 10814 (+)
Gene ID: HRGMv2_1486_21_8
Type: pfam
Location: 10949 - 11449 (+)
Gene ID: HRGMv2_1486_21_9
Type: TC
Location: 11453 - 13756 (+)
Gene ID: HRGMv2_1486_21_10
Type: pfam
Location: 13763 - 15703 (+)
Gene ID: HRGMv2_1486_21_11
Type: TC
Location: 16069 - 17682 (+)
Gene ID: HRGMv2_1486_21_12
Type: TC
Location: 17840 - 18796 (+)
Gene ID: HRGMv2_1486_21_13
Type: TC
Location: 18800 - 20815 (+)
Gene ID: HRGMv2_1486_21_14
Type: TC
Location: 20816 - 21643 (+)
Gene ID: HRGMv2_1486_21_15
Type: CAZyme
Location: 21775 - 22701 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List