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Cluster: HRGMv2_1474_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1474_49 HRGMv2_1474_49_1 29 823 - 3.A.1.34.1
TC HRGMv2_1474_49 HRGMv2_1474_49_2 816 1739 - 3.A.1.34.1
TC HRGMv2_1474_49 HRGMv2_1474_49_3 1944 2924 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_1474_49 HRGMv2_1474_49_4 3085 3870 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1474_49 HRGMv2_1474_49_5 4129 5532 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_1474_49 HRGMv2_1474_49_6 5715 6278 - 4.A.1.2.6
peptidase HRGMv2_1474_49 HRGMv2_1474_49_7 6522 7421 + S09.UPW
TC HRGMv2_1474_49 HRGMv2_1474_49_8 7894 10254 + 9.A.8.1.6
TC HRGMv2_1474_49 HRGMv2_1474_49_9 10375 11571 + 2.A.1.2.18
CAZyme HRGMv2_1474_49 HRGMv2_1474_49_10 11725 13101 + GH13_20
Gene ID: HRGMv2_1474_49_1
Type: TC
Location: 29 - 823 (-)
Gene ID: HRGMv2_1474_49_2
Type: TC
Location: 816 - 1739 (-)
Gene ID: HRGMv2_1474_49_3
Type: TC
Location: 1944 - 2924 (-)
Gene ID: HRGMv2_1474_49_4
Type:
Location: 3085 - 3870 (-)
Gene ID: HRGMv2_1474_49_5
Type: pfam
Location: 4129 - 5532 (-)
Gene ID: HRGMv2_1474_49_6
Type: TC
Location: 5715 - 6278 (-)
Gene ID: HRGMv2_1474_49_7
Type: peptidase
Location: 6522 - 7421 (+)
Gene ID: HRGMv2_1474_49_8
Type: TC
Location: 7894 - 10254 (+)
Gene ID: HRGMv2_1474_49_9
Type: TC
Location: 10375 - 11571 (+)
Gene ID: HRGMv2_1474_49_10
Type: CAZyme
Location: 11725 - 13101 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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