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Cluster: HRGMv2_1474_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1474_155 HRGMv2_1474_155_2 1607 3112 + GH77
CAZyme HRGMv2_1474_155 HRGMv2_1474_155_3 3241 5508 + GT35
TC HRGMv2_1474_155 HRGMv2_1474_155_4 5966 7165 - 3.A.1.1.22
TC HRGMv2_1474_155 HRGMv2_1474_155_5 7234 8073 - 3.A.1.1.45
TC HRGMv2_1474_155 HRGMv2_1474_155_6 8073 8927 - 3.A.1.1.45
TC HRGMv2_1474_155 HRGMv2_1474_155_7 9015 10331 - 3.A.1.1.45
pfam HRGMv2_1474_155 HRGMv2_1474_155_8 10638 10916 - UTRA
TF HRGMv2_1474_155 HRGMv2_1474_155_9 10892 11356 - GntR
TC HRGMv2_1474_155 HRGMv2_1474_155_10 11619 14027 + 4.A.1.1.8
Gene ID: HRGMv2_1474_155_2
Type: CAZyme
Location: 1607 - 3112 (+)
Gene ID: HRGMv2_1474_155_3
Type: CAZyme
Location: 3241 - 5508 (+)
Gene ID: HRGMv2_1474_155_4
Type: TC
Location: 5966 - 7165 (-)
Gene ID: HRGMv2_1474_155_5
Type: TC
Location: 7234 - 8073 (-)
Gene ID: HRGMv2_1474_155_6
Type: TC
Location: 8073 - 8927 (-)
Gene ID: HRGMv2_1474_155_7
Type: TC
Location: 9015 - 10331 (-)
Gene ID: HRGMv2_1474_155_8
Type: pfam
Location: 10638 - 10916 (-)
Gene ID: HRGMv2_1474_155_9
Type: TF
Location: 10892 - 11356 (-)
Gene ID: HRGMv2_1474_155_10
Type: TC
Location: 11619 - 14027 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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