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Cluster: HRGMv2_1446_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1446_10 HRGMv2_1446_10_3 1823 2353 + 4.A.1.2.5
pfam HRGMv2_1446_10 HRGMv2_1446_10_4 2360 3226 + PRD | PRD | CAT_RBD
TC HRGMv2_1446_10 HRGMv2_1446_10_5 3326 4942 + 4.A.1.1.3
CAZyme HRGMv2_1446_10 HRGMv2_1446_10_6 4946 6328 + GH4
STP HRGMv2_1446_10 HRGMv2_1446_10_7 6585 8417 + Pyr_redox_2
TC HRGMv2_1446_10 HRGMv2_1446_10_8 8411 10222 + 3.D.1.5.1
NULL(UNKNOWN) HRGMv2_1446_10 HRGMv2_1446_10_9 10225 11280 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1446_10 HRGMv2_1446_10_10 11284 12660 + 3.A.1.17.10
Gene ID: HRGMv2_1446_10_3
Type: TC
Location: 1823 - 2353 (+)
Gene ID: HRGMv2_1446_10_4
Type: pfam
Location: 2360 - 3226 (+)
Gene ID: HRGMv2_1446_10_5
Type: TC
Location: 3326 - 4942 (+)
Gene ID: HRGMv2_1446_10_6
Type: CAZyme
Location: 4946 - 6328 (+)
Gene ID: HRGMv2_1446_10_7
Type: STP
Location: 6585 - 8417 (+)
Gene ID: HRGMv2_1446_10_8
Type: TC
Location: 8411 - 10222 (+)
Gene ID: HRGMv2_1446_10_9
Type:
Location: 10225 - 11280 (+)
Gene ID: HRGMv2_1446_10_10
Type: TC
Location: 11284 - 12660 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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