dbCAN Logo

PROTEIN: HRGMv2_1446_10_9

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_1446_10_9.pdb
Genome ID:
HRGMv2_1446
Protein ID:
HRGMv2_1446_10_9

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MRAFDFELSR   RGFASALAAG   ALSLALAGCG   GGAAGAGSAA   GSAATDGAGA   AAEPVEVRVA 60
SLKGPTSIGL   VQFMDRAADG   ETDNEFDFAI   NTAADEIVPK   VIQDDIDIAL   VPANVASVLY 120
NKTEGAVQVI   DINTLGVLNV   VTGNADVTSF   GDLAGHTVYM   TGKGTTPEYV   MNYLLERAGL 180
TGQVALEFKS   EPTEVLSVLL   ADPSAVGVLP   EPFKTAAIAK   SEGKLSAPVS   LTDVWDELAG 240
DTGSRLLTGV   TVVRRAFAEE   HPEAVAEFLS   CHAASVEDVN   AVPADWAQAV   VDAGIVDNAA 300
IAEKAIPGCM   LVCQTGRDMK   AALGGYLQVL   ADADASAVGG   KLPADDFYYM   E 351
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q5F6W2-F1-model_v4 53 350 28 325 0.7478 0.862
AF-Q9I0P2-F1-model_v4 50 351 19 306 0.71 0.8371
AF-A0A0H3GZA9-F1-model_v4 52 351 25 310 0.7098 0.8441
AF-A0A0H3GP99-F1-model_v4 47 351 19 318 0.7092 0.8159
AF-A0A0D2GYL1-F1-model_v4 54 351 1 295 0.7046 0.8057
AF-A0A0H3GR32-F1-model_v4 51 351 46 344 0.6896 0.8156
AF-U7PRE8-F1-model_v4 51 351 14 321 0.689 0.7939
AF-U7Q5Y8-F1-model_v4 49 351 2 313 0.6875 0.789
AF-U7PXF6-F1-model_v4 54 351 1 294 0.6841 0.808
AF-Q9I0N8-F1-model_v4 53 351 25 310 0.6817 0.8054
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-D6D3U4-F1-model_v4 GH23 52 301 40 446 0.4291 0.6659
AF-A0A1C7H7G1-F1-model_v4 GH23 52 302 37 327 0.4286 0.6631
AF-A0A0P0ETY4-F1-model_v4 GH23 52 301 44 449 0.4283 0.668
AF-A0A1Y4PH24-F1-model_v4 GH23 52 301 37 442 0.4283 0.6624
AF-L0RFS4-F1-model_v4 GH23 37 304 8 451 0.4276 0.6302
AF-F7LTV0-F1-model_v4 GH23 52 301 37 443 0.4274 0.6618
A0A975KCS4 GH23 49 302 43 339 0.4269 0.6608
AF-E6SPV9-F1-model_v4 GH23 24 301 22 443 0.4269 0.6041
AF-A0A081TW54-F1-model_v4 GH23 52 301 37 442 0.4254 0.6593
AF-A0A0K6BW89-F1-model_v4 GH23 52 301 37 442 0.4254 0.6593
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
C8W6R6 CBM50 47 315 50 335 0.5267 0.6769
A0A9J6ZRE9 GH23 16 298 26 297 0.4271 0.6233
A0A975KCS4 GH23 49 302 43 339 0.4269 0.6608
C6BRT1 GH23 44 304 38 474 0.4197 0.6416
E1YCM4 GH23 25 304 11 447 0.4185 0.591
A0A2D2N719 GH23 31 301 64 502 0.4154 0.6294
A8ZWR8 GH23 24 304 10 450 0.4143 0.5777
UZP75243.1 GH23 18 304 10 440 0.4104 0.5712
A0A6I6K4Y9 GH23 52 299 48 299 0.4088 0.6414
A0A1Y3Y3U2 GH23 52 299 37 282 0.408 0.639
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3hn0-assembly1.cif.gz_A 54 351 1 279 0.7901 0.8963
2x26-assembly2.cif.gz_B 53 350 1 286 0.7346 0.8364
2x26-assembly1.cif.gz_A 53 351 1 287 0.716 0.8349
3un6-assembly1.cif.gz_A 54 351 1 283 0.6836 0.7885
3uif-assembly1.cif.gz_A 53 351 3 307 0.6767 0.7868
3ksx-assembly1.cif.gz_A 52 351 1 289 0.6672 0.7553
7ahr-assembly1.cif.gz_A 54 351 5 280 0.6625 0.7735
6st1-assembly2.cif.gz_B 56 351 1 295 0.6555 0.7391
7an6-assembly1.cif.gz_B 54 351 5 282 0.6552 0.761
7an9-assembly1.cif.gz_B 55 351 1 277 0.6545 0.7549
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-C0SP84-F1-model_v4 52 351 28 325 0.6924 0.8097
AF-A9WGD2-F1-model_v4 52 351 42 344 0.6774 0.8047
AF-Q9KXN1-F1-model_v4 53 350 1 282 0.6743 0.7712
AF-P75853-F1-model_v4 45 351 16 311 0.6656 0.7702
AF-Q5SI12-F1-model_v4 55 349 1 272 0.6469 0.7515
AF-Q8FUN4-F1-model_v4 50 351 19 317 0.6456 0.7407
AF-Q576E1-F1-model_v4 50 351 19 317 0.6392 0.7345
AF-Q5ZV75-F1-model_v4 53 351 5 297 0.6386 0.7452
AF-Q47537-F1-model_v4 53 351 20 317 0.6375 0.7363
AF-Q2YJB6-F1-model_v4 50 351 19 317 0.637 0.7322
Download Full SwissProt Results