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Cluster: HRGMv2_1438_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1438_18 HRGMv2_1438_18_9 9319 11658 - 3.A.3.5.15
TC HRGMv2_1438_18 HRGMv2_1438_18_10 12229 14460 + 1.I.1.1.3
TC HRGMv2_1438_18 HRGMv2_1438_18_11 14918 15430 + 4.A.1.2.5
pfam HRGMv2_1438_18 HRGMv2_1438_18_12 15449 16303 + PRD | PRD | CAT_RBD
TC HRGMv2_1438_18 HRGMv2_1438_18_13 16403 18019 + 4.A.1.1.3
CAZyme HRGMv2_1438_18 HRGMv2_1438_18_14 18023 19405 + GH4
Gene ID: HRGMv2_1438_18_9
Type: TC
Location: 9319 - 11658 (-)
Gene ID: HRGMv2_1438_18_10
Type: TC
Location: 12229 - 14460 (+)
Gene ID: HRGMv2_1438_18_11
Type: TC
Location: 14918 - 15430 (+)
Gene ID: HRGMv2_1438_18_12
Type: pfam
Location: 15449 - 16303 (+)
Gene ID: HRGMv2_1438_18_13
Type: TC
Location: 16403 - 18019 (+)
Gene ID: HRGMv2_1438_18_14
Type: CAZyme
Location: 18023 - 19405 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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