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Cluster: HRGMv2_1438_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1438_1 HRGMv2_1438_1_82 93959 94297 - 4.A.3.1.2
TF HRGMv2_1438_1 HRGMv2_1438_1_83 94512 95516 - LacI
TC HRGMv2_1438_1 HRGMv2_1438_1_84 95872 97641 + 4.A.3.1.1
CAZyme HRGMv2_1438_1 HRGMv2_1438_1_85 97712 99151 + GH1
TF HRGMv2_1438_1 HRGMv2_1438_1_86 99507 100517 - LacI
TC HRGMv2_1438_1 HRGMv2_1438_1_87 100793 102571 + 4.A.3.1.1
CAZyme HRGMv2_1438_1 HRGMv2_1438_1_88 102647 104068 + GH1
TF HRGMv2_1438_1 HRGMv2_1438_1_89 104581 105345 - HTH_DeoR
sulfatase HRGMv2_1438_1 HRGMv2_1438_1_90 105552 106604 + S1_4
TC HRGMv2_1438_1 HRGMv2_1438_1_91 106931 107413 - 4.A.6.1.5
Gene ID: HRGMv2_1438_1_82
Type: TC
Location: 93959 - 94297 (-)
Gene ID: HRGMv2_1438_1_83
Type: TF
Location: 94512 - 95516 (-)
Gene ID: HRGMv2_1438_1_84
Type: TC
Location: 95872 - 97641 (+)
Gene ID: HRGMv2_1438_1_85
Type: CAZyme
Location: 97712 - 99151 (+)
Gene ID: HRGMv2_1438_1_86
Type: TF
Location: 99507 - 100517 (-)
Gene ID: HRGMv2_1438_1_87
Type: TC
Location: 100793 - 102571 (+)
Gene ID: HRGMv2_1438_1_88
Type: CAZyme
Location: 102647 - 104068 (+)
Gene ID: HRGMv2_1438_1_89
Type: TF
Location: 104581 - 105345 (-)
Gene ID: HRGMv2_1438_1_90
Type: sulfatase
Location: 105552 - 106604 (+)
Gene ID: HRGMv2_1438_1_91
Type: TC
Location: 106931 - 107413 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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