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Cluster: HRGMv2_1438_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1438_24 HRGMv2_1438_24_9 8176 9102 - CE7
TC HRGMv2_1438_24 HRGMv2_1438_24_10 9234 10061 - 3.A.1.5.27
TC HRGMv2_1438_24 HRGMv2_1438_24_11 10062 12077 - 3.A.1.5.25
TC HRGMv2_1438_24 HRGMv2_1438_24_12 12081 13037 - 3.A.1.5.38
TC HRGMv2_1438_24 HRGMv2_1438_24_13 13195 14808 - 3.A.1.5.27
pfam HRGMv2_1438_24 HRGMv2_1438_24_14 15174 17114 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1438_24 HRGMv2_1438_24_15 17121 19424 - 2.A.66.4.4
Gene ID: HRGMv2_1438_24_9
Type: CAZyme
Location: 8176 - 9102 (-)
Gene ID: HRGMv2_1438_24_10
Type: TC
Location: 9234 - 10061 (-)
Gene ID: HRGMv2_1438_24_11
Type: TC
Location: 10062 - 12077 (-)
Gene ID: HRGMv2_1438_24_12
Type: TC
Location: 12081 - 13037 (-)
Gene ID: HRGMv2_1438_24_13
Type: TC
Location: 13195 - 14808 (-)
Gene ID: HRGMv2_1438_24_14
Type: pfam
Location: 15174 - 17114 (-)
Gene ID: HRGMv2_1438_24_15
Type: TC
Location: 17121 - 19424 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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