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Cluster: HRGMv2_1396_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1396_6 HRGMv2_1396_6_101 116681 118933 + 1.I.1.1.3
TC HRGMv2_1396_6 HRGMv2_1396_6_102 119412 119924 + 4.A.1.2.5
pfam HRGMv2_1396_6 HRGMv2_1396_6_103 119931 120797 + PRD | PRD | CAT_RBD
TC HRGMv2_1396_6 HRGMv2_1396_6_104 120897 122513 + 4.A.1.1.3
CAZyme HRGMv2_1396_6 HRGMv2_1396_6_105 122517 123899 + GH4
STP HRGMv2_1396_6 HRGMv2_1396_6_106 124156 125988 + Pyr_redox_2
TC HRGMv2_1396_6 HRGMv2_1396_6_107 125982 127793 + 3.D.1.5.1
NULL(UNKNOWN) HRGMv2_1396_6 HRGMv2_1396_6_108 127796 128854 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1396_6 HRGMv2_1396_6_109 128858 130234 + 3.A.1.17.10
Gene ID: HRGMv2_1396_6_101
Type: TC
Location: 116681 - 118933 (+)
Gene ID: HRGMv2_1396_6_102
Type: TC
Location: 119412 - 119924 (+)
Gene ID: HRGMv2_1396_6_103
Type: pfam
Location: 119931 - 120797 (+)
Gene ID: HRGMv2_1396_6_104
Type: TC
Location: 120897 - 122513 (+)
Gene ID: HRGMv2_1396_6_105
Type: CAZyme
Location: 122517 - 123899 (+)
Gene ID: HRGMv2_1396_6_106
Type: STP
Location: 124156 - 125988 (+)
Gene ID: HRGMv2_1396_6_107
Type: TC
Location: 125982 - 127793 (+)
Gene ID: HRGMv2_1396_6_108
Type:
Location: 127796 - 128854 (+)
Gene ID: HRGMv2_1396_6_109
Type: TC
Location: 128858 - 130234 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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