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PROTEIN: HRGMv2_1396_6_108

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Protein File & Metadata
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Source:
HRGMv2_1396_6_108.pdb
Genome ID:
HRGMv2_1396
Protein ID:
HRGMv2_1396_6_108

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Detailed structural information will appear here after analysis...

Protein Sequence 
MRAFDVEMSR   RGFASALAAG   ALSLALAGCG   GGAAGAGSAA   GSAAGSAAGS   AAAEPVEVHV 60
ASLKGPTSIG   LVQFMDQAAN   GETDNEFDFA   INTAADEIVP   KVIQGDVDIA   LVPANVASVL 120
YNKTEGAVQV   IDINTLGVLN   VVTGDAGVTT   FGDLAGRTVY   MTGKGTTPEY   VMNYLLERAG 180
LTGQVTLEFK   SEPTEVLSAL   LANPSAVGVL   PEPFKTAAIA   KSEGKLSAPV   SLTDVWDELA 240
GDTGSRLLTG   VTVVRRAFAE   EHPEAVAEFL   RCHEASVKAV   NAAPTDWAQA   VVDAGIVDNA 300
KIAEKAIPGC   MLVCQTGKDM   KAALSGYLQV   LADADASAVG   GKLPADDFYY   ME 352
Protein Structure Viewer

Confidence Score (pLDDT)

Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q5F6W2-F1-model_v4 54 351 28 325 0.7444 0.8585
AF-A0A0H3GZA9-F1-model_v4 53 352 25 310 0.7069 0.8418
AF-Q9I0P2-F1-model_v4 51 352 19 306 0.7064 0.834
AF-A0A0H3GP99-F1-model_v4 48 352 19 318 0.7057 0.8132
AF-A0A0D2GYL1-F1-model_v4 55 352 1 295 0.7006 0.8024
AF-A0A0H3GR32-F1-model_v4 52 352 46 344 0.6853 0.8116
AF-U7PRE8-F1-model_v4 53 352 15 321 0.6838 0.7922
AF-U7Q5Y8-F1-model_v4 51 352 2 313 0.6828 0.7874
AF-U7PXF6-F1-model_v4 55 352 1 294 0.6799 0.8043
AF-Q9I0N8-F1-model_v4 54 352 25 310 0.6773 0.8014
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A1Y4PH24-F1-model_v4 GH23 23 302 21 443 0.4359 0.6151
AF-A0A1C7H7G1-F1-model_v4 GH23 24 302 25 442 0.4334 0.6134
AF-E1WT20-F1-model_v4 GH23 20 302 24 443 0.4303 0.6018
AF-A0A0P0GMK8-F1-model_v4 GH23 24 302 25 442 0.4296 0.608
AF-A0A0K6BW89-F1-model_v4 GH23 20 302 24 442 0.4295 0.5997
A0A975KCS4 GH23 51 303 43 339 0.4264 0.6618
AF-L0RFS4-F1-model_v4 GH23 32 305 4 451 0.4254 0.6157
AF-B3PLH7-F1-model_v4 GH23 53 302 41 442 0.4226 0.6735
AF-A0A0K2J3V1-F1-model_v4 GH23 51 302 60 480 0.4214 0.6662
AF-A0A3T0VQB1-F1-model_v4 GH23 22 305 32 466 0.3975 0.5731
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A975KCS4 GH23 51 303 43 339 0.4264 0.6618
A0A9J6ZRE9 GH23 16 299 28 297 0.4221 0.619
E1YCM4 GH23 23 305 12 450 0.4212 0.5901
C6BRT1 GH23 43 305 34 474 0.4188 0.6371
UZP75243.1 GH23 16 306 10 441 0.4114 0.5653
A0A6I6K4Y9 GH23 22 300 38 299 0.4084 0.615
A0A0S2HZI4 GH23 19 300 34 305 0.4011 0.5883
A0A3T0VQB1 GH23 22 305 32 466 0.3975 0.5731
A0A7R6TN95 GH23 14 304 46 497 0.3889 0.5571
Q0VPC5 GH23 53 299 273 519 0.356 0.6394
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3hn0-assembly1.cif.gz_A 55 352 1 279 0.7855 0.8923
2x26-assembly2.cif.gz_B 54 351 1 286 0.7314 0.8339
2x26-assembly1.cif.gz_A 54 352 1 287 0.7128 0.8323
3un6-assembly1.cif.gz_A 55 352 1 283 0.6793 0.7848
3uif-assembly1.cif.gz_A 54 352 3 307 0.6751 0.7858
3ksx-assembly1.cif.gz_A 53 352 1 289 0.6629 0.7518
7ahr-assembly1.cif.gz_A 55 352 5 280 0.659 0.7705
7an6-assembly1.cif.gz_B 55 352 5 282 0.6523 0.7577
6st1-assembly2.cif.gz_B 57 352 1 295 0.6509 0.7352
7an9-assembly1.cif.gz_B 56 352 1 277 0.6508 0.7516
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-C0SP84-F1-model_v4 53 352 28 325 0.689 0.8064
AF-A9WGD2-F1-model_v4 53 352 42 344 0.6745 0.8026
AF-Q9KXN1-F1-model_v4 54 351 1 282 0.67 0.7674
AF-P75853-F1-model_v4 46 352 16 311 0.6609 0.7658
AF-Q8FUN4-F1-model_v4 51 352 19 317 0.642 0.7372
AF-Q576E1-F1-model_v4 51 352 19 317 0.6353 0.7311
AF-Q5ZV75-F1-model_v4 54 352 5 297 0.6349 0.7419
AF-Q47537-F1-model_v4 54 352 20 317 0.6332 0.7324
AF-Q2YJB6-F1-model_v4 51 352 19 317 0.6328 0.7285
AF-Q8YDR6-F1-model_v4 51 352 19 317 0.6322 0.7279
Download Full SwissProt Results