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Cluster: HRGMv2_1056_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1056_6 HRGMv2_1056_6_12 14937 17390 - 4.A.1.1.8
TF HRGMv2_1056_6 HRGMv2_1056_6_13 17619 18338 + GntR
TC HRGMv2_1056_6 HRGMv2_1056_6_14 18645 19961 + 3.A.1.1.45
TC HRGMv2_1056_6 HRGMv2_1056_6_15 20050 20904 + 3.A.1.1.45
TC HRGMv2_1056_6 HRGMv2_1056_6_16 20904 21743 + 3.A.1.1.45
TC HRGMv2_1056_6 HRGMv2_1056_6_17 21812 23011 + 3.A.1.1.22
CAZyme HRGMv2_1056_6 HRGMv2_1056_6_18 23548 25815 - GT35
CAZyme HRGMv2_1056_6 HRGMv2_1056_6_19 25944 27449 - GH77
Gene ID: HRGMv2_1056_6_12
Type: TC
Location: 14937 - 17390 (-)
Gene ID: HRGMv2_1056_6_13
Type: TF
Location: 17619 - 18338 (+)
Gene ID: HRGMv2_1056_6_14
Type: TC
Location: 18645 - 19961 (+)
Gene ID: HRGMv2_1056_6_15
Type: TC
Location: 20050 - 20904 (+)
Gene ID: HRGMv2_1056_6_16
Type: TC
Location: 20904 - 21743 (+)
Gene ID: HRGMv2_1056_6_17
Type: TC
Location: 21812 - 23011 (+)
Gene ID: HRGMv2_1056_6_18
Type: CAZyme
Location: 23548 - 25815 (-)
Gene ID: HRGMv2_1056_6_19
Type: CAZyme
Location: 25944 - 27449 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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