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Cluster: HRGMv2_1056_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1056_20 HRGMv2_1056_20_6 6792 7622 - 3.A.1.132.3
pfam HRGMv2_1056_20 HRGMv2_1056_20_7 7883 10762 + UvrA_DNA-bind | UvrA_inter
pfam HRGMv2_1056_20 HRGMv2_1056_20_8 10897 11397 + tRNA_edit
TC HRGMv2_1056_20 HRGMv2_1056_20_9 11401 13083 + 2.A.66.4.4
pfam HRGMv2_1056_20 HRGMv2_1056_20_10 13090 15030 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1056_20 HRGMv2_1056_20_11 15395 17008 + 3.A.1.5.27
TC HRGMv2_1056_20 HRGMv2_1056_20_12 17166 18122 + 3.A.1.5.38
TC HRGMv2_1056_20 HRGMv2_1056_20_13 18126 20141 + 3.A.1.5.25
TC HRGMv2_1056_20 HRGMv2_1056_20_14 20142 20969 + 3.A.1.5.27
CAZyme HRGMv2_1056_20 HRGMv2_1056_20_15 21143 22027 + CE7
Gene ID: HRGMv2_1056_20_6
Type: TC
Location: 6792 - 7622 (-)
Gene ID: HRGMv2_1056_20_7
Type: pfam
Location: 7883 - 10762 (+)
Gene ID: HRGMv2_1056_20_8
Type: pfam
Location: 10897 - 11397 (+)
Gene ID: HRGMv2_1056_20_9
Type: TC
Location: 11401 - 13083 (+)
Gene ID: HRGMv2_1056_20_10
Type: pfam
Location: 13090 - 15030 (+)
Gene ID: HRGMv2_1056_20_11
Type: TC
Location: 15395 - 17008 (+)
Gene ID: HRGMv2_1056_20_12
Type: TC
Location: 17166 - 18122 (+)
Gene ID: HRGMv2_1056_20_13
Type: TC
Location: 18126 - 20141 (+)
Gene ID: HRGMv2_1056_20_14
Type: TC
Location: 20142 - 20969 (+)
Gene ID: HRGMv2_1056_20_15
Type: CAZyme
Location: 21143 - 22027 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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