dbCAN HGM

Cluster: HRGMv2_1056_CGC16

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_1056_12	HRGMv2_1056_12_48	51003	51770	-	3.A.1.103.1
TC	HRGMv2_1056_12	HRGMv2_1056_12_49	51783	52628	-	3.A.1.103.6
CAZyme	HRGMv2_1056_12	HRGMv2_1056_12_50	52790	53719	+	GT81
CAZyme	HRGMv2_1056_12	HRGMv2_1056_12_51	53751	55592	-	GT2
pfam	HRGMv2_1056_12	HRGMv2_1056_12_52	55625	56812	-	LicD
CAZyme	HRGMv2_1056_12	HRGMv2_1056_12_53	56912	58792	-	GT2

Gene ID: HRGMv2_1056_12_48
Type: TC
Location: 51003 - 51770 (-)

Gene ID: HRGMv2_1056_12_49
Type: TC
Location: 51783 - 52628 (-)

Gene ID: HRGMv2_1056_12_50
Type: CAZyme
Location: 52790 - 53719 (+)

Gene ID: HRGMv2_1056_12_51
Type: CAZyme
Location: 53751 - 55592 (-)

Gene ID: HRGMv2_1056_12_52
Type: pfam
Location: 55625 - 56812 (-)

Gene ID: HRGMv2_1056_12_53
Type: CAZyme
Location: 56912 - 58792 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_1056_12_49	vegan > omnivore	1.84322	0.00863
HRGMv2_1056_12_50	vegan > omnivore	1.42726	0.00863
HRGMv2_1056_12_51	vegan > omnivore	17.52272	0.00863
HRGMv2_1056_12_51	vegetarian > omnivore	12.81578	0.04505
HRGMv2_1056_12_52	vegan > omnivore	17.70719	0.00863
HRGMv2_1056_12_53	vegan > omnivore	10.19921	0.00863