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Cluster: HRGMv2_1056_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1056_8 HRGMv2_1056_8_27 24891 26312 - GH1
TC HRGMv2_1056_8 HRGMv2_1056_8_28 26388 28178 - 4.A.3.1.1
TF HRGMv2_1056_8 HRGMv2_1056_8_29 28454 29464 + LacI
CAZyme HRGMv2_1056_8 HRGMv2_1056_8_30 29809 31248 - GH1
TC HRGMv2_1056_8 HRGMv2_1056_8_31 31315 33090 - 4.A.3.1.1
TF HRGMv2_1056_8 HRGMv2_1056_8_32 33448 34452 + LacI
TC HRGMv2_1056_8 HRGMv2_1056_8_33 34667 35005 + 4.A.3.1.2
Gene ID: HRGMv2_1056_8_27
Type: CAZyme
Location: 24891 - 26312 (-)
Gene ID: HRGMv2_1056_8_28
Type: TC
Location: 26388 - 28178 (-)
Gene ID: HRGMv2_1056_8_29
Type: TF
Location: 28454 - 29464 (+)
Gene ID: HRGMv2_1056_8_30
Type: CAZyme
Location: 29809 - 31248 (-)
Gene ID: HRGMv2_1056_8_31
Type: TC
Location: 31315 - 33090 (-)
Gene ID: HRGMv2_1056_8_32
Type: TF
Location: 33448 - 34452 (+)
Gene ID: HRGMv2_1056_8_33
Type: TC
Location: 34667 - 35005 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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