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Cluster: HRGMv2_1056_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1056_8 HRGMv2_1056_8_11 9952 10395 + 4.A.6.1.16
pfam HRGMv2_1056_8 HRGMv2_1056_8_12 10395 10676 + YajC
TC HRGMv2_1056_8 HRGMv2_1056_8_13 10713 11195 + 4.A.6.1.4
TC HRGMv2_1056_8 HRGMv2_1056_8_14 11286 12086 + 4.A.6.1.4
TC HRGMv2_1056_8 HRGMv2_1056_8_15 12076 13158 + 4.A.6.1.4
TF HRGMv2_1056_8 HRGMv2_1056_8_16 13343 14074 + GntR
STP HRGMv2_1056_8 HRGMv2_1056_8_17 14189 15355 + SIS | SIS
CAZyme HRGMv2_1056_8 HRGMv2_1056_8_18 15475 16644 + CE9
Gene ID: HRGMv2_1056_8_11
Type: TC
Location: 9952 - 10395 (+)
Gene ID: HRGMv2_1056_8_12
Type: pfam
Location: 10395 - 10676 (+)
Gene ID: HRGMv2_1056_8_13
Type: TC
Location: 10713 - 11195 (+)
Gene ID: HRGMv2_1056_8_14
Type: TC
Location: 11286 - 12086 (+)
Gene ID: HRGMv2_1056_8_15
Type: TC
Location: 12076 - 13158 (+)
Gene ID: HRGMv2_1056_8_16
Type: TF
Location: 13343 - 14074 (+)
Gene ID: HRGMv2_1056_8_17
Type: STP
Location: 14189 - 15355 (+)
Gene ID: HRGMv2_1056_8_18
Type: CAZyme
Location: 15475 - 16644 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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