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Cluster: HRGMv2_1056_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1056_6 HRGMv2_1056_6_77 86462 87862 + GH1
TC HRGMv2_1056_6 HRGMv2_1056_6_78 87983 89335 + 4.A.3.2.2
TC HRGMv2_1056_6 HRGMv2_1056_6_79 89489 89791 + 4.A.3.2.9
TC HRGMv2_1056_6 HRGMv2_1056_6_80 89801 90133 + 4.A.3.2.3
STP HRGMv2_1056_6 HRGMv2_1056_6_81 90374 91327 + Glucokinase
pfam HRGMv2_1056_6 HRGMv2_1056_6_82 91493 92416 + DHH | DHHA2
TC HRGMv2_1056_6 HRGMv2_1056_6_83 92682 94040 + 2.A.33.1.1
Gene ID: HRGMv2_1056_6_77
Type: CAZyme
Location: 86462 - 87862 (+)
Gene ID: HRGMv2_1056_6_78
Type: TC
Location: 87983 - 89335 (+)
Gene ID: HRGMv2_1056_6_79
Type: TC
Location: 89489 - 89791 (+)
Gene ID: HRGMv2_1056_6_80
Type: TC
Location: 89801 - 90133 (+)
Gene ID: HRGMv2_1056_6_81
Type: STP
Location: 90374 - 91327 (+)
Gene ID: HRGMv2_1056_6_82
Type: pfam
Location: 91493 - 92416 (+)
Gene ID: HRGMv2_1056_6_83
Type: TC
Location: 92682 - 94040 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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