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Cluster: HRGMv2_1038_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1038_3 HRGMv2_1038_3_47 59848 61656 + GH154
pfam HRGMv2_1038_3 HRGMv2_1038_3_48 61811 62242 + EIIA-man
TC HRGMv2_1038_3 HRGMv2_1038_3_49 62292 62780 + 4.A.6.1.3
TC HRGMv2_1038_3 HRGMv2_1038_3_50 62851 63753 + 4.A.6.1.22
TC HRGMv2_1038_3 HRGMv2_1038_3_51 63746 64609 + 4.A.6.1.19
NULL(UNKNOWN) HRGMv2_1038_3 HRGMv2_1038_3_52 64689 65342 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1038_3 HRGMv2_1038_3_53 65323 66474 + GH88
pfam HRGMv2_1038_3 HRGMv2_1038_3_54 66563 67414 + CN_hydrolase
CAZyme HRGMv2_1038_3 HRGMv2_1038_3_55 67414 69045 + CBM91 | GH43_11
NULL(UNKNOWN) HRGMv2_1038_3 HRGMv2_1038_3_56 69056 69913 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1038_3 HRGMv2_1038_3_57 69932 71155 + GH28
CAZyme HRGMv2_1038_3 HRGMv2_1038_3_58 71164 72867 + GH154
NULL(UNKNOWN) HRGMv2_1038_3 HRGMv2_1038_3_59 73036 73476 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1038_3 HRGMv2_1038_3_60 73706 74431 - 3.A.1.15.5
TC HRGMv2_1038_3 HRGMv2_1038_3_61 74424 75083 - 3.A.1.15.3
pfam HRGMv2_1038_3 HRGMv2_1038_3_62 75086 77056 - Sulfatase
TC HRGMv2_1038_3 HRGMv2_1038_3_63 77069 78073 - 3.A.1.15.11
Gene ID: HRGMv2_1038_3_47
Type: CAZyme
Location: 59848 - 61656 (+)
Gene ID: HRGMv2_1038_3_48
Type: pfam
Location: 61811 - 62242 (+)
Gene ID: HRGMv2_1038_3_49
Type: TC
Location: 62292 - 62780 (+)
Gene ID: HRGMv2_1038_3_50
Type: TC
Location: 62851 - 63753 (+)
Gene ID: HRGMv2_1038_3_51
Type: TC
Location: 63746 - 64609 (+)
Gene ID: HRGMv2_1038_3_52
Type:
Location: 64689 - 65342 (+)
Gene ID: HRGMv2_1038_3_53
Type: CAZyme
Location: 65323 - 66474 (+)
Gene ID: HRGMv2_1038_3_54
Type: pfam
Location: 66563 - 67414 (+)
Gene ID: HRGMv2_1038_3_55
Type: CAZyme
Location: 67414 - 69045 (+)
Gene ID: HRGMv2_1038_3_56
Type:
Location: 69056 - 69913 (+)
Gene ID: HRGMv2_1038_3_57
Type: CAZyme
Location: 69932 - 71155 (+)
Gene ID: HRGMv2_1038_3_58
Type: CAZyme
Location: 71164 - 72867 (+)
Gene ID: HRGMv2_1038_3_59
Type:
Location: 73036 - 73476 (-)
Gene ID: HRGMv2_1038_3_60
Type: TC
Location: 73706 - 74431 (-)
Gene ID: HRGMv2_1038_3_61
Type: TC
Location: 74424 - 75083 (-)
Gene ID: HRGMv2_1038_3_62
Type: pfam
Location: 75086 - 77056 (-)
Gene ID: HRGMv2_1038_3_63
Type: TC
Location: 77069 - 78073 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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